RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 TRGV9Q99603 122 aa11.09□□□□□ -0.63
PDGFRB-201ENST00000261799 TOMM40O96008 361 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 CA1P00915 261 aaPredicted RBP11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 DEFB131AP59861 70 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 IGHV3-73A0A0B4J1V6 119 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 SRSF1Q07955 248 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 TMEM86BQ8N661 226 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 APOHP02749 345 aaPredicted RBP11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 RCC1LQ96I51 464 aaKnown RBP11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 FOXC2Q99958 501 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 SLX1AQ9BQ83 275 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 IL36BQ9NZH7 164 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 ZNF319Q9P2F9 582 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 TDGF1P3P51864 188 aa11.08□□□□□ -0.64
PDGFRB-201ENST00000261799 KIAA1671Q9BY89 1806 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 ATP6V0E1O15342 81 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 SLC25A39Q9BZJ4 359 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 LBHQ53QV2 105 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 OR5A1Q8NGJ0 315 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 C18orf15Q96N68 181 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 ANK1P16157 1881 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 SRRM4A7MD48 611 aaKnown RBP11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 LMO1P25800 156 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 ABCA7Q8IZY2 2146 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 IGKV2-40A0A087WW87 121 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 IGKV2D-40P01614 121 aaPredicted RBP11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 C10orf55Q5SWW7 151 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 BIVMQ86UB2 503 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 CBLN2Q8IUK8 224 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 C11orf68Q9H3H3 251 aaKnown RBP11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 TRIOBPQ9H2D6 2365 aa11.07□□□□□ -0.64
PDGFRB-201ENST00000261799 ZNF25P17030 456 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 SPATA45Q537H7 98 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 ZNF506Q5JVG8 444 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 FAM89BQ8N5H3 189 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 IZUMO1RA6ND01 250 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 PYYP10082 97 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 MPTX1A8MV57 137 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 ZNF138P52744 262 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 SS18Q15532 418 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 PAM16Q9Y3D7 125 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 MDKP21741 143 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 C11orf91Q3C1V1 193 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 PRR32B1ATL7 298 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 VPREB3Q9UKI3 123 aa11.06□□□□□ -0.64
PDGFRB-201ENST00000261799 IGKV1-12A0A0C4DH73 117 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 IGKV1D-12P01611 117 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 ORMDL2Q53FV1 153 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 ST6GALNAC6Q969X2 333 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 APC2O95996 2303 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 FOXL2NBQ6ZUU3 175 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 PNRC2Q9NPJ4 139 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 ELANEP08246 267 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 ATP5G3P48201 142 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 FAM215AQ9Y5M1 114 aa11.05□□□□□ -0.64
PDGFRB-201ENST00000261799 LINC01549A6NIU2 74 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 CD55P08174 381 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 KLF17Q5JT82 389 aaPredicted RBP11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 Q6P435 159 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 DOCK6Q96HP0 2047 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 FABP2P12104 132 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 JKAMPQ9P055 326 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 NDUFA3O95167 84 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 ERCC8Q13216 396 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 KIAA1644Q3SXP7 199 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 DOCK4Q8N1I0 1966 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 IGKV1-27A0A075B6S5 117 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 LINC00587B1AMM8 73 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 LHFPL4Q7Z7J7 247 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 PTPRFP10586 1907 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 A0A1W2PRE2 83 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 F8WEM9 126 aa11.04□□□□□ -0.64
PDGFRB-201ENST00000261799 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 LINC00158P58513 81 aa11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 ZNF562Q6V9R5 426 aa11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 SCRT1Q9BWW7 348 aa11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 CGB7P0DN87 165 aa11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 CST9LQ9H4G1 147 aa11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 PMS2P5A8MQ11 134 aa11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 PPIFP30405 207 aaKnown RBP11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 OTX1P32242 354 aaPredicted RBP11.03□□□□□ -0.64
PDGFRB-201ENST00000261799 TRAV9-1A0A075B6T8 112 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 SOD3P08294 240 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 C1QL4Q86Z23 238 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 TRBV6-6A0A0A6YYG2 114 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 IGHV2-5P01817 119 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 PPBPP02775 128 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 H2BFSP57053 126 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 DLX4Q92988 240 aaPredicted RBP11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 COQ2Q96H96 371 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 XCL2Q9UBD3 114 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 GZMBP10144 247 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 GREB1Q4ZG55 1949 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 SLC25A34Q6PIV7 304 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 PRORYQ9H606 182 aa11.02□□□□□ -0.65
PDGFRB-201ENST00000261799 A0A0A6YYD4 124 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms