RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 TAX1BP3O14907 124 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 DEDDO75618 318 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 IGKV3-11P04433 115 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 TLX1NBP0CAT3 122 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 ADCYAP1P18509 176 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 CCL1P22362 96 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 PPIBP23284 216 aaKnown RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 NFYAP23511 347 aaPredicted RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 SRP14P37108 136 aaKnown RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 INPP1P49441 399 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 MP68P56378 58 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 RPL23P62829 140 aaKnown RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 PLGLB1Q02325 96 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 EIF3IQ13347 325 aaKnown RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 DEFB116Q30KQ4 102 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 ORMDL2Q53FV1 153 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 UBE2NLQ5JXB2 153 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 Q6AWC8 147 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 SHISA6Q6ZSJ9 500 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 Q6ZUT4 128 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 DAZ4Q86SG3 579 aaKnown RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 DRAM1Q8N682 238 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 POP5Q969H6 163 aaKnown RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 CARD19Q96LW7 228 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 YPEL4Q96NS1 127 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 SLC25A21Q9BQT8 299 aaPredicted RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 TSSK6Q9BXA6 273 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 DAZ1Q9NQZ3 744 aaKnown RBP2.66□□□□□ -1.98
CCDC54-201ENST00000261058 TVP23BQ9NYZ1 205 aa2.66□□□□□ -1.98
CCDC54-201ENST00000261058 PLIN4Q96Q06 1357 aa2.65□□□□□ -1.98
CCDC54-201ENST00000261058 DOCK6Q96HP0 2047 aa2.65□□□□□ -1.98
CCDC54-201ENST00000261058 CDC42BPAQ5VT25 1732 aa2.65□□□□□ -1.98
CCDC54-201ENST00000261058 SYNJ1O43426 1573 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 DOCK9Q9BZ29 2069 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ATRNO75882 1429 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 BLMP54132 1417 aaPredicted RBP2.65□□□□□ -1.99
CCDC54-201ENST00000261058 THSD7AQ9UPZ6 1657 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 MYH6P13533 1939 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 A0A087WWC5 75 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 TRAV4A0A0B4J268 109 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 OR2T8A6NH00 312 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF705FA8MVS1 300 aaPredicted RBP2.65□□□□□ -1.99
CCDC54-201ENST00000261058 LY6LH3BQJ8 138 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF324O75467 553 aaPredicted RBP2.65□□□□□ -1.99
CCDC54-201ENST00000261058 LYZL6O75951 148 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 WISP3O95389 354 aaPredicted RBP2.65□□□□□ -1.99
CCDC54-201ENST00000261058 SIX6O95475 246 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 CYB5AP00167 134 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 HRASP01112 189 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 HLA-DQB1P01920 261 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF705DP0CH99 300 aaPredicted RBP2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF705BP0CI00 300 aaPredicted RBP2.65□□□□□ -1.99
CCDC54-201ENST00000261058 CRYGSP22914 178 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 IL3RAP26951 378 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 UBE2AP49459 152 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 TMEM258P61165 79 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 HERVK_113P63121 156 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ADIRFQ15847 76 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 RTL8BQ17RB0 113 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 RRN3P1Q2M238 152 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 VMA21Q3ZAQ7 101 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 XAF1Q6GPH4 301 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 Q6ZS92 163 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 MDP1Q86V88 176 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 LHFPL1Q86WI0 220 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 OR1J4Q8NGS1 313 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 OR4K13Q8NH42 304 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ATP6V0E2Q8NHE4 81 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 DPH3Q96FX2 82 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 AQP10Q96PS8 301 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 NMNAT3Q96T66 252 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 PLA2G2FQ9BZM2 168 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 COMMD5Q9GZQ3 224 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 PLEKHF2Q9H8W4 249 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 TMEM106BQ9NUM4 274 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 RPUSD1Q9UJJ7 312 aaKnown RBP2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF222Q9UK12 451 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 LINC00312Q9Y6C7 94 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 MROH1Q8NDA8 1641 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 ATP10BO94823 1461 aa2.65□□□□□ -1.99
CCDC54-201ENST00000261058 TNS2Q63HR2 1409 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 UBR2Q8IWV8 1755 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 IGHV3-74A0A0B4J1X5 117 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ODAMA1E959 279 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 C7orf77A4D0Y5 90 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ARRDC5A6NEK1 342 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 MCRIP1C9JLW8 97 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 GABARAPH6UMI1 98 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 M0R1X1 148 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 UQCRQO14949 82 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 GSTZ1O43708 216 aaPredicted RBP2.64□□□□□ -1.99
CCDC54-201ENST00000261058 COX7A2P2O60397 106 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 PGLYRP1O75594 196 aaPredicted RBP2.64□□□□□ -1.99
CCDC54-201ENST00000261058 APOMO95445 188 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 SFT2D2O95562 160 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 HLA-DPB1P04440 258 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 IGLC2P0DOY2 106 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 IGLC3P0DOY3 106 aa2.64□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF823P16415 610 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms