RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 FAM72AQ5TYM5 149 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 FAM72DQ6L9T8 149 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 FAM72BQ86X60 149 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 POM121L12Q8N7R1 296 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 SMRP1Q8NCR6 262 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 ARHGEF17Q96PE2 2063 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-201ENST00000258733 hADV29S1A0JD25 119 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 CLDN14O95500 239 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 FRG2Q64ET8 278 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 KCTD18Q6PI47 426 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-201ENST00000258733 C6orf201Q7Z4U5 140 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 PCP2Q8IVA1 136 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 AMN1Q8IY45 258 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 TDHQ8IZJ6 230 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 FRG2BQ96QU4 278 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 AGPAT4-IT1Q9H0P7 198 aa6.23□□□□□ -1.41
GPNMB-201ENST00000258733 TRBV20OR9-2A0A075B6H5 130 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 H3BSH0 61 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 SCGB1C2P0DMR2 95 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 HLA-DRB4P13762 266 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 PRDX1Q06830 199 aaKnown RBP6.22□□□□□ -1.41
GPNMB-201ENST00000258733 EBI3Q14213 229 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 SBSPONQ8IVN8 264 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 ODF3L1Q8IXM7 274 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 C10orf105Q8TEF2 133 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 CLEC4CQ8WTT0 213 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 CHCHD1Q96BP2 118 aaKnown RBP6.22□□□□□ -1.41
GPNMB-201ENST00000258733 URB1-AS1Q96HZ7 61 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 TAAR2Q9P1P5 351 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 HLA-DRB4X5D2U9 266 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 SPTBP11277 2137 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 SSSCA1O60232 199 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 IGHG1P01857 330 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 ATP5G1P05496 136 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 ATP5G3P48201 142 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 C11orf45Q8TAV5 145 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 SHANK2-AS3Q9BTD1 123 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 MRPL20Q9BYC9 149 aaKnown RBP6.22□□□□□ -1.41
GPNMB-201ENST00000258733 PHPT1Q9NRX4 125 aaPredicted RBP6.22□□□□□ -1.41
GPNMB-201ENST00000258733 ANAPC10Q9UM13 185 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 OARD1Q9Y530 152 aa6.22□□□□□ -1.41
GPNMB-201ENST00000258733 EPPINO95925 133 aa6.21□□□□□ -1.41
GPNMB-201ENST00000258733 C11orf44Q8N8P7 122 aa6.21□□□□□ -1.41
GPNMB-201ENST00000258733 CHAC1Q9BUX1 264 aa6.21□□□□□ -1.41
GPNMB-201ENST00000258733 EPDR1Q9UM22 224 aa6.21□□□□□ -1.41
GPNMB-201ENST00000258733 ZNF256Q9Y2P7 627 aaPredicted RBP6.21□□□□□ -1.41
GPNMB-201ENST00000258733 TCL1BO95988 128 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 ECI1P42126 302 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 VMA21Q3ZAQ7 101 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 TREML4Q6UXN2 200 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.21□□□□□ -1.42
GPNMB-201ENST00000258733 RPP25LQ8N5L8 163 aaKnown RBP6.21□□□□□ -1.42
GPNMB-201ENST00000258733 C18orf12Q96KH6 178 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 C16orf92Q96LL3 132 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 DEPPQ9NTK1 212 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 OCIAD1Q9NX40 245 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 Q9UF83 564 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 RPUSD1Q9UJJ7 312 aaKnown RBP6.21□□□□□ -1.42
GPNMB-201ENST00000258733 V9GYV3 84 aa6.21□□□□□ -1.42
GPNMB-201ENST00000258733 TRAV8-4A0A0B4J246 113 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 CTXND1A0A1B0GTU2 59 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 NPIPB11E5RHQ5 1161 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 HAX1O00165 279 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 NDUFS7O75251 213 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 NCR2O95944 276 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 IGKCP01834 107 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 AMY2BP19961 511 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 PSMB2P49721 201 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 IZUMO4Q1ZYL8 232 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 BORCS8Q96FH0 119 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 LINC00527Q9UJ94 153 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 TANC2Q9HCD6 1990 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 PTPRDP23468 1912 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 GREB1Q4ZG55 1949 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 CPAMD8Q8IZJ3 1885 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 C1orf105O95561 183 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 TMEM52BQ4KMG9 183 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 CEMP1Q6PRD7 247 aaPredicted RBP6.2□□□□□ -1.42
GPNMB-201ENST00000258733 DGAT2L6Q6ZPD8 337 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 SLC25A22Q9H936 323 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 OTORQ9NRC9 128 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 CACNG5Q9UF02 275 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 AGRNO00468 2067 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 COX6A1P12074 109 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 GFERP55789 205 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 RPL30P62888 115 aaKnown RBP6.2□□□□□ -1.42
GPNMB-201ENST00000258733 TMEM255BQ8WV15 326 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 NMNAT3Q96T66 252 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 PLEKHA3Q9HB20 300 aa6.2□□□□□ -1.42
GPNMB-201ENST00000258733 A0A1B0GTH9 108 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 K7EMI3 77 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 PDCD6O75340 191 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 LYPD3O95274 346 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 PSMB8P28062 276 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 HILS1P60008 231 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 ERVK-16P61578 105 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 CYSTM1Q9H1C7 97 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 KIF26BQ2KJY2 2108 aa6.19□□□□□ -1.42
GPNMB-201ENST00000258733 H3BVH4 76 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms