RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 NEIL1Q96FI4 390 aaPredicted RBP9.23□□□□□ -0.93
PDE6B-201ENST00000255622 ENSAO43768 121 aaKnown RBP9.23□□□□□ -0.93
PDE6B-201ENST00000255622 MT-ATP8P03928 68 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 ETDBQ3ZM63 59 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 PDLIM3Q53GG5 364 aaPredicted RBP9.23□□□□□ -0.93
PDE6B-201ENST00000255622 MIC13Q5XKP0 118 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 IGFL2Q6UWQ7 119 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 C8orf86Q6ZUL3 223 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 SSMEM1Q8WWF3 244 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 ANAPC16Q96DE5 110 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 MGST2Q99735 147 aa9.23□□□□□ -0.93
PDE6B-201ENST00000255622 PLCE1Q9P212 2302 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 TRBV20-1A0A075B6N2 111 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 A0A0G2JLM5 398 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 FCN1O00602 326 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 NDUFB4O95168 129 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 HTR1DP28221 377 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 PMCHL1Q16048 86 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 SGMS2Q8NHU3 365 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 GFRA3O60609 400 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 IER3P46695 156 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 SRSF1Q07955 248 aaKnown RBP eCLIP9.22□□□□□ -0.93
PDE6B-201ENST00000255622 TNXAQ16473 311 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 ITLN1Q8WWA0 313 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 SPAG8Q99932 426 aaPredicted RBP9.22□□□□□ -0.93
PDE6B-201ENST00000255622 SPATA25Q9BR10 227 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 MRPL18Q9H0U6 180 aaKnown RBP9.22□□□□□ -0.93
PDE6B-201ENST00000255622 ZNRD1Q9P1U0 126 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 INSIG2Q9Y5U4 225 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 ACACAQ13085 2346 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 ZNF292O60281 2723 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 J3QR06 171 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 TNFRSF13BO14836 293 aaPredicted RBP9.22□□□□□ -0.93
PDE6B-201ENST00000255622 MGST3O14880 152 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 SPINK4O60575 86 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 ARL14EPLP0DKL9 152 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 VDAC2P45880 294 aaPredicted RBP9.22□□□□□ -0.93
PDE6B-201ENST00000255622 GNG4P50150 75 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 HLA-DRB5Q30154 266 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 ZNF474Q6S9Z5 364 aaPredicted RBP9.22□□□□□ -0.93
PDE6B-201ENST00000255622 C22orf34Q6ZV56 151 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 FA2HQ7L5A8 372 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 DEFB108BQ8NET1 73 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 C1orf159Q96HA4 380 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 RCHY1Q96PM5 261 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 S1PR3Q99500 378 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 CALYQ9NYX4 217 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 CYSLTR1Q9Y271 337 aa9.22□□□□□ -0.93
PDE6B-201ENST00000255622 TCL1AP56279 114 aa9.21□□□□□ -0.93
PDE6B-201ENST00000255622 SNRNP40Q96DI7 357 aaKnown RBP9.21□□□□□ -0.93
PDE6B-201ENST00000255622 hDV102S1A0JD36 115 aa9.21□□□□□ -0.94
PDE6B-201ENST00000255622 PRSS46E5RG02 174 aa9.21□□□□□ -0.94
PDE6B-201ENST00000255622 CA2P00918 260 aa9.21□□□□□ -0.94
PDE6B-201ENST00000255622 ERVK-16P61578 105 aa9.21□□□□□ -0.94
PDE6B-201ENST00000255622 CT45A1Q5HYN5 189 aa9.21□□□□□ -0.94
PDE6B-201ENST00000255622 PIP4P1Q86T03 277 aa9.21□□□□□ -0.94
PDE6B-201ENST00000255622 CT45A3Q8NHU0 189 aa9.21□□□□□ -0.94
PDE6B-201ENST00000255622 GGTLC1Q9BX51 225 aa9.21□□□□□ -0.94
PDE6B-201ENST00000255622 RAI1Q7Z5J4 1906 aaPredicted RBP9.21□□□□□ -0.94
PDE6B-201ENST00000255622 TRBV20OR9-2A0A075B6H5 130 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 SAA2-SAA4A0A096LPE2 208 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 GAGE12JA6NER3 117 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 C9orf118A6NHY6 69 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 GAGE7O76087 117 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 GAGE12FP0CL80 117 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 GAGE12GP0CL81 117 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 GAGE12IP0CL82 117 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 SAA2P0DJI9 122 aaPredicted RBP9.2□□□□□ -0.94
PDE6B-201ENST00000255622 GAGE4Q13068 117 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 C17orf58Q2M2W7 97 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 GNB4Q9HAV0 340 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 TYMSP04818 313 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 HIST1H1EP10412 219 aaKnown RBP9.2□□□□□ -0.94
PDE6B-201ENST00000255622 WFDC2Q14508 124 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 OR5A1Q8NGJ0 315 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 VSTM2AQ8TAG5 236 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 TCF19Q9Y242 345 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 RELNP78509 3460 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 TACC2O95359 2948 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 FABP2P12104 132 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 INSL3P51460 131 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 SPATA12Q7Z6I5 190 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 DDB2Q92466 427 aa9.2□□□□□ -0.94
PDE6B-201ENST00000255622 ANKRD11Q6UB99 2663 aaPredicted RBP9.19□□□□□ -0.94
PDE6B-201ENST00000255622 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
PDE6B-201ENST00000255622 FAM215AQ9Y5M1 114 aa9.19□□□□□ -0.94
PDE6B-201ENST00000255622 DSCAML1Q8TD84 2053 aa9.19□□□□□ -0.94
PDE6B-201ENST00000255622 FOXH1O75593 365 aa9.19□□□□□ -0.94
PDE6B-201ENST00000255622 LCN2P80188 198 aa9.19□□□□□ -0.94
PDE6B-201ENST00000255622 C8orf46Q8TAG6 207 aa9.19□□□□□ -0.94
PDE6B-201ENST00000255622 CEP295Q9C0D2 2601 aa9.19□□□□□ -0.94
PDE6B-201ENST00000255622 SMIM9A6NGZ8 99 aa9.18□□□□□ -0.94
PDE6B-201ENST00000255622 LHBP01229 141 aa9.18□□□□□ -0.94
PDE6B-201ENST00000255622 OPRK1P41145 380 aa9.18□□□□□ -0.94
PDE6B-201ENST00000255622 SRSF2Q01130 221 aaKnown RBP9.18□□□□□ -0.94
PDE6B-201ENST00000255622 ZNF90Q03938 601 aa9.18□□□□□ -0.94
PDE6B-201ENST00000255622 MOB3BQ86TA1 216 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms