RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 C22orf15Q8WYQ4 148 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 FRZBQ92765 325 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 GSX1Q9H4S2 264 aaPredicted RBP14.91□□□□□ -0.02
TRIM47-201ENST00000254816 HLA-DRB1P01911 266 aa14.9□□□□□ -0.02
TRIM47-201ENST00000254816 ETFRF1Q6IPR1 90 aa14.9□□□□□ -0.02
TRIM47-201ENST00000254816 SEPSECSQ9HD40 501 aaKnown RBP14.9□□□□□ -0.02
TRIM47-201ENST00000254816 LINC01548A6NM66 108 aa14.9□□□□□ -0.02
TRIM47-201ENST00000254816 CORTO00230 105 aa14.9□□□□□ -0.02
TRIM47-201ENST00000254816 SOX15O60248 233 aa14.9□□□□□ -0.02
TRIM47-201ENST00000254816 HOXA5P20719 270 aa14.9□□□□□ -0.02
TRIM47-201ENST00000254816 C5orf56Q8N8D9 126 aa14.9□□□□□ -0.02
TRIM47-201ENST00000254816 PDZD2O15018 2839 aa14.9□□□□□ -0.02
TRIM47-201ENST00000254816 H3BUX3 64 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 H7BYZ3 331 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 I3L2K1 104 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 TRGC1P0CF51 173 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 GFI1BQ5VTD9 330 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 BCL6BQ8N143 479 aaPredicted RBP14.89□□□□□ -0.03
TRIM47-201ENST00000254816 WFDC11Q8NEX6 87 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 RBM14Q96PK6 669 aaKnown RBP14.89□□□□□ -0.03
TRIM47-201ENST00000254816 TRBV24-1A0A075B6N3 115 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 NDUFB4O95168 129 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 STAG3L2P0CL84 134 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 STAG3L3P0CL85 134 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 GALR1P47211 349 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 PDZD11Q5EBL8 140 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 PRSS57Q6UWY2 283 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 THAP8Q8NA92 274 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 TCEAL7Q9BRU2 100 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 S4R3C0 116 aa14.89□□□□□ -0.03
TRIM47-201ENST00000254816 PFN1P07737 140 aaKnown RBP14.88□□□□□ -0.03
TRIM47-201ENST00000254816 NIT2Q9NQR4 276 aa14.88□□□□□ -0.03
TRIM47-201ENST00000254816 TCRBV4S1A1TA0A5B7 111 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 PGPEP1LA6NFU8 196 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 J3QLI3 93 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 ATP6V0E1O15342 81 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 ECSCRQ19T08 205 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 TTC9CQ8N5M4 171 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 TEX15Q9BXT5 2789 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 NPIPB5A8MRT5 1133 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 K7EIM0 57 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 PDE6DO43924 150 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 CXorf1O96002 111 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 AMY1AP04745 511 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 CDX1P47902 265 aaPredicted RBP14.87□□□□□ -0.03
TRIM47-201ENST00000254816 FAM78BQ5VT40 261 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 CIARTQ8N365 385 aaPredicted RBP14.87□□□□□ -0.03
TRIM47-201ENST00000254816 TMEM116Q8NCL8 245 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 FANCD2OSQ96PS1 177 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 MOB4Q9Y3A3 225 aa14.87□□□□□ -0.03
TRIM47-201ENST00000254816 MIR17HGQ75NE6 70 aa14.86□□□□□ -0.03
TRIM47-201ENST00000254816 TNFRSF19Q9NS68 423 aa14.86□□□□□ -0.03
TRIM47-201ENST00000254816 YTHDF2Q9Y5A9 579 aaKnown RBP14.86□□□□□ -0.03
TRIM47-201ENST00000254816 PHOX2AO14813 284 aa14.86□□□□□ -0.03
TRIM47-201ENST00000254816 RHOBP62745 196 aa14.86□□□□□ -0.03
TRIM47-201ENST00000254816 TMEM37Q8WXS4 190 aa14.86□□□□□ -0.03
TRIM47-201ENST00000254816 OR5B12Q96R08 314 aa14.86□□□□□ -0.03
TRIM47-201ENST00000254816 SCO2A0A1W2PP80 73 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 SGMS2Q8NHU3 365 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 TMUB1Q9BVT8 246 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 ITPR3Q14573 2671 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 IGLV11-55A0A075B6I3 123 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 A0A1W2PPQ1 181 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 S100PP25815 95 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 GCHFRP30047 84 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 DEFB112Q30KQ8 113 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 UNQ5815/PRO19632Q6UWF5 114 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 LINC01551Q86U37 167 aa14.85□□□□□ -0.03
TRIM47-201ENST00000254816 ITPR2Q14571 2701 aa14.84□□□□□ -0.03
TRIM47-201ENST00000254816 G3V318 75 aa14.84□□□□□ -0.03
TRIM47-201ENST00000254816 C9orf152Q5JTZ5 239 aa14.84□□□□□ -0.03
TRIM47-201ENST00000254816 OR1L6Q8NGR2 347 aa14.84□□□□□ -0.03
TRIM47-201ENST00000254816 PSMB11A5LHX3 300 aa14.83□□□□□ -0.03
TRIM47-201ENST00000254816 A6NDX4 124 aa14.83□□□□□ -0.03
TRIM47-201ENST00000254816 SMAD7O15105 426 aaKnown RBP14.83□□□□□ -0.03
TRIM47-201ENST00000254816 NDUFS6O75380 124 aaKnown RBP14.83□□□□□ -0.03
TRIM47-201ENST00000254816 HNF1AP20823 631 aa14.83□□□□□ -0.03
TRIM47-201ENST00000254816 GPR61Q9BZJ8 451 aa14.83□□□□□ -0.03
TRIM47-201ENST00000254816 TRBV20OR9-2A0A075B6H5 130 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 F6UZH7 168 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 OR2J3O76001 311 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 MORN5Q5VZ52 161 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 OR4X1Q8NH49 305 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 ANAPC16Q96DE5 110 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 TRGV9Q99603 122 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 PYGO2Q9BRQ0 406 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 LINC00527Q9UJ94 153 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 FUT9Q9Y231 359 aa14.83□□□□□ -0.04
TRIM47-201ENST00000254816 PPP1R2P9O14990 202 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 NDUFB8O95169 186 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 IGHV3-23P01764 117 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 TIGITQ495A1 244 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 CYB5R2Q6BCY4 276 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 PATE2Q6UY27 113 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 UHRF2Q96PU4 802 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 SRD5A3Q9H8P0 318 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 OR5G3P0C626 314 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 IGLC1P0CG04 106 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 HIST3H2BBQ8N257 126 aa14.82□□□□□ -0.04
TRIM47-201ENST00000254816 GAR1Q9NY12 217 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms