RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 EPDR1Q9UM22 224 aa16.57■□□□□ 0.24
RARA-201ENST00000254066 SPCS1Q9Y6A9 102 aa16.57■□□□□ 0.24
RARA-201ENST00000254066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.56■□□□□ 0.24
RARA-201ENST00000254066 BRI3O95415 125 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 GTSF1Q8WW33 167 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 P01737 135 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 UQCRFS1P47985 274 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 LOXL3P58215 753 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 ADIPOQQ15848 244 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 ALKBH6Q3KRA9 238 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 ASPHD1Q5U4P2 390 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 OR9G1Q8NH87 305 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 ZC2HC1AQ96GY0 325 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 TMUB1Q9BVT8 246 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 OBP2BQ9NPH6 170 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 SDK1Q7Z5N4 2213 aa16.56■□□□□ 0.24
RARA-201ENST00000254066 TRAV5A0A0B4J249 113 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 LY6G6EA0A0G2JKS1 128 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 TRBV7-9A0A0J9YWB2 115 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 A0A1B0GW15 77 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 LTC4SQ16873 150 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 ZNF826PQ6ZT77 177 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 AP5S1Q9NUS5 200 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 B4GALT7Q9UBV7 327 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 METRNQ9UJH8 293 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 U3KQA8 63 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 DCHS1Q96JQ0 3298 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 CABIN1Q9Y6J0 2220 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 A1L4Q6 167 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 PATE3B3GLJ2 98 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 CDX4O14627 284 aaPredicted RBP16.55■□□□□ 0.24
RARA-201ENST00000254066 MORN5Q5VZ52 161 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 MOB3BQ86TA1 216 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 WDR87Q6ZQQ6 2873 aa16.55■□□□□ 0.24
RARA-201ENST00000254066 FREM1Q5H8C1 2179 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 CNTRLQ7Z7A1 2325 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 COX7A2P2O60397 106 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 CFIP05156 583 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 FABP2P12104 132 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 C10orf113Q5VZT2 155 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 FA2HQ7L5A8 372 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 FXYD5Q96DB9 178 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 FMC1Q96HJ9 113 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 PGLYRP4Q96LB8 373 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 RAB9BQ9NP90 201 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 IGHV3-64DA0A0J9YX35 117 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 SMAD7O15105 426 aaKnown RBP16.54■□□□□ 0.24
RARA-201ENST00000254066 ZNF134P52741 427 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 SSBP2P81877 361 aaPredicted RBP16.54■□□□□ 0.24
RARA-201ENST00000254066 GUSBP1Q15486 140 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 SDK2Q58EX2 2172 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 CCDC144NLQ6NUI1 221 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 GATD1Q8NB37 220 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 PPP1R35Q8TAP8 253 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 FER1L6-AS2Q96M78 137 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 FAM173AQ9BQD7 235 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 DCTN5Q9BTE1 182 aa16.54■□□□□ 0.24
RARA-201ENST00000254066 NPIPB6E9PJ23 425 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 UPK2O00526 184 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 MGST3O14880 152 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 RNASE2P10153 161 aaKnown RBP16.53■□□□□ 0.24
RARA-201ENST00000254066 FOXE3Q13461 319 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 LGALS9BQ3B8N2 356 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 LGALS9CQ6DKI2 356 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 ADAMTSL5Q6ZMM2 481 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 B9A039 149 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 PYYP10082 97 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 SMAGPQ0VAQ4 97 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 DAZAP1Q96EP5 407 aaKnown RBP16.53■□□□□ 0.24
RARA-201ENST00000254066 MRAP2Q96G30 205 aa16.53■□□□□ 0.24
RARA-201ENST00000254066 MCRIP2Q9BUT9 160 aaKnown RBP16.53■□□□□ 0.24
RARA-201ENST00000254066 TEX50A0A1B0GTY4 177 aa16.52■□□□□ 0.24
RARA-201ENST00000254066 TIMM23BQ5SRD1 257 aa16.52■□□□□ 0.24
RARA-201ENST00000254066 OR4A5Q8NH83 315 aa16.52■□□□□ 0.24
RARA-201ENST00000254066 LTAP01374 205 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 PRDX2P32119 198 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 Q0VFX4 171 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 TMEM177Q53S58 311 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 PDPNQ86YL7 162 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 CD177Q8N6Q3 437 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 ARL3P36405 182 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 EDDM3AQ14507 147 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 PSMG4Q5JS54 123 aa16.51■□□□□ 0.23
RARA-201ENST00000254066 CXorf67Q86X51 503 aaPredicted RBP16.51■□□□□ 0.23
RARA-201ENST00000254066 SNAI2O43623 268 aa16.5■□□□□ 0.23
RARA-201ENST00000254066 MOSP00540 346 aa16.5■□□□□ 0.23
RARA-201ENST00000254066 SLC25A5P05141 298 aaKnown RBP16.5■□□□□ 0.23
RARA-201ENST00000254066 CD24P25063 80 aa16.5■□□□□ 0.23
RARA-201ENST00000254066 RPRMLQ8N4K4 120 aa16.5■□□□□ 0.23
RARA-201ENST00000254066 INS-IGF2F8WCM5 200 aa16.5■□□□□ 0.23
RARA-201ENST00000254066 J3QR89 54 aa16.5■□□□□ 0.23
RARA-201ENST00000254066 FSTL3O95633 263 aa16.5■□□□□ 0.23
RARA-201ENST00000254066 APOHP02749 345 aaPredicted RBP16.5■□□□□ 0.23
RARA-201ENST00000254066 FTH1P19P0C7X4 201 aa16.5■□□□□ 0.23
RARA-201ENST00000254066 CD300EQ496F6 205 aaPredicted RBP16.5■□□□□ 0.23
RARA-201ENST00000254066 KLF14Q8TD94 323 aaPredicted RBP16.5■□□□□ 0.23
RARA-201ENST00000254066 GEMIN7Q9H840 131 aaKnown RBP16.5■□□□□ 0.23
RARA-201ENST00000254066 TFF1P04155 84 aa16.49■□□□□ 0.23
RARA-201ENST00000254066 FABP6P51161 128 aa16.49■□□□□ 0.23
RARA-201ENST00000254066 KLF13Q9Y2Y9 288 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms