RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 FGFBP3Q8TAT2 258 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 FBLIM1Q8WUP2 373 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 CKAP5Q14008 2032 aa11.79□□□□□ -0.52
ZC3H4-201ENST00000253048 THADAQ6YHU6 1953 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 TRBV9A0A0B4J1U6 114 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 SELLP14151 372 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 PRTN3P24158 256 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 LYPD2Q6UXB3 125 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 C9orf139Q6ZV77 190 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 TRBV6-7A0A0A0MS04 114 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 ZNF561-AS1K7EIQ3 104 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 AGAP20933 346 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 FOXG1P55316 489 aaPredicted RBP11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 MORN3Q6PF18 240 aaPredicted RBP11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 OVOL3O00110 214 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 TRAV8-4A0A0B4J246 113 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 MPTX1A8MV57 137 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 LINC00587B1AMM8 73 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 SLC25A48Q6ZT89 311 aaKnown RBP11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 ST6GALNAC6Q969X2 333 aa11.78□□□□□ -0.52
ZC3H4-201ENST00000253048 GNG5P63218 68 aa11.77□□□□□ -0.52
ZC3H4-201ENST00000253048 CYSLTR1Q9Y271 337 aa11.77□□□□□ -0.52
ZC3H4-201ENST00000253048 SRRM4A7MD48 611 aaKnown RBP11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 MDKP21741 143 aaPredicted RBP11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 TSSC4Q9Y5U2 329 aaPredicted RBP11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 APOHP02749 345 aaPredicted RBP11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 PIN1P1O15428 100 aa11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 LGALS1P09382 135 aaKnown RBP11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 KLF2Q9Y5W3 355 aaPredicted RBP11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 H3BMM0 161 aa11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 PLNP26678 52 aa11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 UBE2WQ96B02 151 aa11.77□□□□□ -0.53
ZC3H4-201ENST00000253048 PAX4O43316 350 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 ERCC8Q13216 396 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 GFI1BQ5VTD9 330 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 LOC285556D6RIA3 1793 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 UCP1P25874 307 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 PPIFP30405 207 aaKnown RBP11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 ATXN8Q156A1 80 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 PAQR4Q8N4S7 273 aaPredicted RBP11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 ORAOV1Q8WV07 137 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 PSG8Q9UQ74 426 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 CLPSP04118 112 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 ORMDL3Q8N138 153 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 A0A0G2JMZ2 1700 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 LRRC37A2A6NM11 1700 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 CFHR3Q02985 330 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 SDHCQ99643 169 aaPredicted RBP11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 XCL2Q9UBD3 114 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 A0A1B0GUS0 222 aa11.76□□□□□ -0.53
ZC3H4-201ENST00000253048 DNAJC13O75165 2243 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 CD177Q8N6Q3 437 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 LDLRAD4O15165 306 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 DUTP33316 252 aaKnown RBP11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 SRSF1Q07955 248 aaKnown RBP eCLIP11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 C9orf66Q5T8R8 295 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 LYZL4Q96KX0 146 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 C22orf46C9J442 243 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 PIP4P1Q86T03 277 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 STPG2Q8N412 459 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
ZC3H4-201ENST00000253048 OR10W1Q8NGF6 305 aa11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 TRAV2A0A0B4J234 112 aa11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 CCDC88CQ9P219 2028 aa11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 CFHR2P36980 270 aa11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 LINC00477Q96M19 166 aa11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 LINC00614P0C842 121 aa11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 FOXA3P55318 350 aaPredicted RBP11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 ZNF876PQ49A33 203 aa11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 DKK4Q9UBT3 224 aa11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
ZC3H4-201ENST00000253048 FAM90A9PA6NNJ1 464 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 C6orf226Q5I0X4 101 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 IGKV2-40A0A087WW87 121 aaPredicted RBP11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 A0A1B0GWJ7 208 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 IGKV2D-40P01614 121 aaPredicted RBP11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 RAMP3O60896 148 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 SPCS1Q9Y6A9 102 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 CEP290O15078 2479 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 SCO2A0A1W2PP80 73 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 GAGE2EQ4V326 116 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 GAGE2DQ9UEU5 116 aa11.73□□□□□ -0.53
ZC3H4-201ENST00000253048 ZNF250P15622 560 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 DMRTA1Q5VZB9 504 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 KLK5Q9Y337 293 aaPredicted RBP11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 SLC25A39Q9BZJ4 359 aaPredicted RBP11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 F2Z2F3 143 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 EPDR1Q9UM22 224 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 MTCL1Q9Y4B5 1905 aaKnown RBP11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 H0YJW9 148 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 M0R2P5 195 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 EFNA2O43921 213 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 ORMDL2Q53FV1 153 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 C10orf55Q5SWW7 151 aa11.72□□□□□ -0.53
ZC3H4-201ENST00000253048 CBLN2Q8IUK8 224 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms