RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 USP9YO00507 2555 aaPredicted RBP18.09■□□□□ 0.49
HOXD9-201ENST00000249499 TRAV9-1A0A075B6T8 112 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 TRAV30A0A087WSZ9 112 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 IGHV3-21A0A0B4J1V1 117 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BKO60814 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BJP06899 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 PYYP10082 97 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 PSG1P11464 419 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BOP23527 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BBP33778 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BDP58876 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BCP62807 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 PAX8Q06710 450 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST2H2BEQ16778 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.09■□□□□ 0.49
HOXD9-201ENST00000249499 C10orf105Q8TEF2 133 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BHQ93079 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BNQ99877 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 HIST1H2BMQ99879 126 aa18.09■□□□□ 0.49
HOXD9-201ENST00000249499 IGLV11-55A0A075B6I3 123 aa18.08■□□□□ 0.49
HOXD9-201ENST00000249499 A0A1W2PPQ1 181 aa18.08■□□□□ 0.49
HOXD9-201ENST00000249499 VWC2LB2RUY7 222 aa18.08■□□□□ 0.49
HOXD9-201ENST00000249499 HLA-DRB1P01911 266 aa18.08■□□□□ 0.49
HOXD9-201ENST00000249499 SAA4P35542 130 aa18.08■□□□□ 0.49
HOXD9-201ENST00000249499 CENPWQ5EE01 88 aa18.08■□□□□ 0.49
HOXD9-201ENST00000249499 RBM14Q96PK6 669 aaKnown RBP18.08■□□□□ 0.49
HOXD9-201ENST00000249499 AURKAIP1Q9NWT8 199 aaPredicted RBP18.08■□□□□ 0.49
HOXD9-201ENST00000249499 CDC42EP3Q9UKI2 254 aa18.08■□□□□ 0.49
HOXD9-201ENST00000249499 ZNF98A6NK75 572 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 K7EN84 100 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 IGKV1-17P01599 117 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 HOXA5P20719 270 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 MYCNOSP40205 109 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 MEOX2P50222 304 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 TIGITQ495A1 244 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 ASPHD1Q5U4P2 390 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 Q8N9W7 124 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 THYN1Q9P016 225 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 PTPN13Q12923 2485 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 NPFFO15130 113 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 ZNF329Q86UD4 541 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 FAM103A1Q9BTL3 118 aaKnown RBP18.07■□□□□ 0.48
HOXD9-201ENST00000249499 TMEM14CQ9P0S9 112 aa18.07■□□□□ 0.48
HOXD9-201ENST00000249499 S100A9P06702 114 aaKnown RBP18.06■□□□□ 0.48
HOXD9-201ENST00000249499 RD3LP0DJH9 198 aa18.06■□□□□ 0.48
HOXD9-201ENST00000249499 CLEC2AQ6UVW9 174 aa18.06■□□□□ 0.48
HOXD9-201ENST00000249499 FRZBQ92765 325 aa18.06■□□□□ 0.48
HOXD9-201ENST00000249499 IGF2BP2-AS1Q96M15 143 aa18.06■□□□□ 0.48
HOXD9-201ENST00000249499 FANCD2OSQ96PS1 177 aa18.06■□□□□ 0.48
HOXD9-201ENST00000249499 C12orf57Q99622 126 aa18.06■□□□□ 0.48
HOXD9-201ENST00000249499 TOMM40O96008 361 aa18.05■□□□□ 0.48
HOXD9-201ENST00000249499 TRGC1P0CF51 173 aa18.05■□□□□ 0.48
HOXD9-201ENST00000249499 SMIM6P0DI80 62 aa18.05■□□□□ 0.48
HOXD9-201ENST00000249499 GP9P14770 177 aa18.05■□□□□ 0.48
HOXD9-201ENST00000249499 NDUFA6P56556 154 aa18.05■□□□□ 0.48
HOXD9-201ENST00000249499 NDPQ00604 133 aa18.05■□□□□ 0.48
HOXD9-201ENST00000249499 S100A7AQ86SG5 101 aa18.05■□□□□ 0.48
HOXD9-201ENST00000249499 MRPL27Q9P0M9 148 aaKnown RBP18.05■□□□□ 0.48
HOXD9-201ENST00000249499 CNN1P51911 297 aaKnown RBP18.05■□□□□ 0.48
HOXD9-201ENST00000249499 YPEL3P61236 119 aaPredicted RBP18.05■□□□□ 0.48
HOXD9-201ENST00000249499 SGMS2Q8NHU3 365 aa18.05■□□□□ 0.48
HOXD9-201ENST00000249499 IGHV7-81A0A0B4J1V7 117 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 GCGP01275 180 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 NBEAP1P0C6P0 100 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 CDX1P47902 265 aaPredicted RBP18.04■□□□□ 0.48
HOXD9-201ENST00000249499 MFAP4P55083 255 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 LYZP61626 148 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 KLK9Q2XQG4 91 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 GSX1Q9H4S2 264 aaPredicted RBP18.04■□□□□ 0.48
HOXD9-201ENST00000249499 OSTCQ9NRP0 149 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 IL36BQ9NZH7 164 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 KLK9Q9UKQ9 250 aa18.04■□□□□ 0.48
HOXD9-201ENST00000249499 CENPVL3A0A0U1RRI6 287 aa18.03■□□□□ 0.48
HOXD9-201ENST00000249499 PEX7O00628 323 aa18.03■□□□□ 0.48
HOXD9-201ENST00000249499 SLC25A39Q9BZJ4 359 aaPredicted RBP18.03■□□□□ 0.48
HOXD9-201ENST00000249499 HIST1H1BP16401 226 aaKnown RBP18.03■□□□□ 0.48
HOXD9-201ENST00000249499 RNF24Q9Y225 148 aa18.03■□□□□ 0.48
HOXD9-201ENST00000249499 IGHV4-61A0A0C4DH41 118 aa18.02■□□□□ 0.48
HOXD9-201ENST00000249499 ISLRO14498 428 aa18.02■□□□□ 0.48
HOXD9-201ENST00000249499 SCGB2A1O75556 95 aa18.02■□□□□ 0.48
HOXD9-201ENST00000249499 ATP5J2P56134 94 aa18.02■□□□□ 0.48
HOXD9-201ENST00000249499 ACTL10Q5JWF8 245 aa18.02■□□□□ 0.48
HOXD9-201ENST00000249499 SMIM12Q96EX1 92 aa18.02■□□□□ 0.48
HOXD9-201ENST00000249499 TMEM68Q96MH6 324 aa18.02■□□□□ 0.48
HOXD9-201ENST00000249499 IGLV2-8P01709 118 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 EGR2P11161 476 aaPredicted RBP18.01■□□□□ 0.47
HOXD9-201ENST00000249499 HNF1AP20823 631 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 FCGR2BP31994 310 aaPredicted RBP18.01■□□□□ 0.47
HOXD9-201ENST00000249499 ERVFC1-1P60608 527 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 PIP4P2Q8N4L2 257 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 CRYBG3Q68DQ2 2970 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 GNG7O60262 68 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 PAX1P15863 534 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 DSCR9P59020 149 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 FAM120AOSQ5T036 256 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 TXN2Q99757 166 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 SHANK2-AS3Q9BTD1 123 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 EPDR1Q9UM22 224 aa18.01■□□□□ 0.47
HOXD9-201ENST00000249499 WI2-2373I1.2A0A1W2PRP0 233 aa18■□□□□ 0.47
HOXD9-201ENST00000249499 C5orf17Q8NAS9 161 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms