RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 STAG3L2P0CL84 134 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 STAG3L3P0CL85 134 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 PSMB3P49720 205 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 PLGLAQ15195 96 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 OR1P1Q8NH06 330 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 NOTCH3Q9UM47 2321 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 CRYGCP07315 174 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 OR10J1P30954 320 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 BRS3P32247 399 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 MFAP2P55001 183 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 GNB1P62873 340 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 MEF2BQ02080 365 aaPredicted RBP13.59□□□□□ -0.23
HOXC6-201ENST00000243108 FAM90A2PQ658T7 463 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 THAP8Q8NA92 274 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 RBM14Q96PK6 669 aaKnown RBP13.59□□□□□ -0.23
HOXC6-201ENST00000243108 SLC25A33Q9BSK2 321 aa13.59□□□□□ -0.23
HOXC6-201ENST00000243108 CD81P60033 236 aa13.58□□□□□ -0.24
HOXC6-201ENST00000243108 RHOBP62745 196 aa13.58□□□□□ -0.24
HOXC6-201ENST00000243108 C5orf64Q2M2E5 130 aa13.58□□□□□ -0.24
HOXC6-201ENST00000243108 TMEM88Q6PEY1 159 aa13.58□□□□□ -0.24
HOXC6-201ENST00000243108 ABHD5Q8WTS1 349 aa13.58□□□□□ -0.24
HOXC6-201ENST00000243108 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.24
HOXC6-201ENST00000243108 F11RQ9Y624 299 aaKnown RBP13.58□□□□□ -0.24
HOXC6-201ENST00000243108 DNAH3Q8TD57 4116 aa13.58□□□□□ -0.24
HOXC6-201ENST00000243108 CORTO00230 105 aa13.57□□□□□ -0.24
HOXC6-201ENST00000243108 RHEBQ15382 184 aa13.57□□□□□ -0.24
HOXC6-201ENST00000243108 NSUN5P1Q3KNT7 163 aa13.57□□□□□ -0.24
HOXC6-201ENST00000243108 ETFRF1Q6IPR1 90 aa13.57□□□□□ -0.24
HOXC6-201ENST00000243108 CBLN2Q8IUK8 224 aa13.57□□□□□ -0.24
HOXC6-201ENST00000243108 ACY3Q96HD9 319 aa13.57□□□□□ -0.24
HOXC6-201ENST00000243108 H3BQ15 152 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 HES1Q14469 280 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 TCTEX1D4Q5JR98 221 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 CYP2G1PQ6ZSU1 146 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 C16orf82Q7Z2V1 217 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 IGKV1D-37A0A075B6S9 117 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 C7orf77A4D0Y5 90 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 M0R036 132 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 CXorf1O96002 111 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 C10orf99Q6UWK7 81 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 GATAD1Q8WUU5 269 aa13.56□□□□□ -0.24
HOXC6-201ENST00000243108 SEPSECSQ9HD40 501 aaKnown RBP13.56□□□□□ -0.24
HOXC6-201ENST00000243108 MRPL36Q9P0J6 103 aaKnown RBP13.56□□□□□ -0.24
HOXC6-201ENST00000243108 PUS1Q9Y606 427 aaKnown RBP eCLIP13.56□□□□□ -0.24
HOXC6-201ENST00000243108 G3V4G9 280 aa13.55□□□□□ -0.24
HOXC6-201ENST00000243108 TMEM250H0YL14 139 aa13.55□□□□□ -0.24
HOXC6-201ENST00000243108 TSPAN4O14817 238 aa13.55□□□□□ -0.24
HOXC6-201ENST00000243108 ARL14EPLP0DKL9 152 aa13.55□□□□□ -0.24
HOXC6-201ENST00000243108 CEBPGP53567 150 aa13.55□□□□□ -0.24
HOXC6-201ENST00000243108 NPIPB3Q92617 1050 aa13.55□□□□□ -0.24
HOXC6-201ENST00000243108 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
HOXC6-201ENST00000243108 DMRT1Q9Y5R6 373 aa13.55□□□□□ -0.24
HOXC6-201ENST00000243108 TCRBV4S1A1TA0A5B7 111 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 PSMB11A5LHX3 300 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 PAGE4O60829 102 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 CNIH1O95406 144 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 OR5G3P0C626 314 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 APELAP0DMC3 54 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 SPATA31B1PQ5VZV4 182 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 C19orf35Q6ZS72 473 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 IQCF2Q8IXL9 164 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 TMEM116Q8NCL8 245 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 OR5AU1Q8NGC0 362 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 RPS10P5Q9NQ39 176 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 FUT9Q9Y231 359 aa13.54□□□□□ -0.24
HOXC6-201ENST00000243108 CTRB1P17538 263 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 GATA2P23769 480 aaPredicted RBP13.53□□□□□ -0.24
HOXC6-201ENST00000243108 RND2P52198 227 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 SELENOTP62341 195 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 FXYD3Q14802 87 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 CTRB2Q6GPI1 263 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 NDUFA11Q86Y39 141 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 TVP23CQ96ET8 276 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 C20orf24Q9BUV8 137 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 TMEM11P17152 192 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 FAM78BQ5VT40 261 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
HOXC6-201ENST00000243108 MT-CO2P00403 227 aa13.52□□□□□ -0.25
HOXC6-201ENST00000243108 IGHV3-48P01763 117 aa13.52□□□□□ -0.25
HOXC6-201ENST00000243108 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
HOXC6-201ENST00000243108 GCHFRP30047 84 aa13.52□□□□□ -0.25
HOXC6-201ENST00000243108 AKIRIN2Q53H80 203 aa13.52□□□□□ -0.25
HOXC6-201ENST00000243108 TRGV9Q99603 122 aa13.52□□□□□ -0.25
HOXC6-201ENST00000243108 TXNDC17Q9BRA2 123 aa13.52□□□□□ -0.25
HOXC6-201ENST00000243108 TUBA4BQ9H853 241 aa13.52□□□□□ -0.25
HOXC6-201ENST00000243108 AKR1C3P42330 323 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 SAMD5Q5TGI4 173 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 MIR17HGQ75NE6 70 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 OR1L6Q8NGR2 347 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 TMEM37Q8WXS4 190 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 OR4F4Q96R69 305 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 RNF2Q99496 336 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
HOXC6-201ENST00000243108 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
HOXC6-201ENST00000243108 A0A1W2PRX2 142 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 C11orf94C9JXX5 98 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 I3L2K1 104 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms