RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 C10orf99Q6UWK7 81 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 RSG1Q9BU20 258 aa8.69□□□□□ -1.02
TNFAIP3-201ENST00000237289 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 IGHV3-49A0A0A0MS15 119 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 IGHV3-74A0A0B4J1X5 117 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 RUNX1Q01196 453 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 DEFB136Q30KP8 78 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 OR10G4Q8NGN3 311 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 OR10G9Q8NGN4 311 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 OR10G7Q8NGN6 311 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 WDR61Q9GZS3 305 aaKnown RBP8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 PPP1R14DQ9NXH3 145 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 TEX15Q9BXT5 2789 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 ATP6V0CP27449 155 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 GALR1P47211 349 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 ZNF491Q8N8L2 437 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 FANCD2OSQ96PS1 177 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 DUX3Q96PT4 197 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 DNAJC4Q9NNZ3 241 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 SAP30O75446 220 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 IFNA1P01562 189 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 RIPPLY3P57055 190 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 BLOC1S1P78537 153 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 IL15RAQ13261 267 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 AARDQ4LEZ3 155 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 NDUFA11Q86Y39 141 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 STPG3Q8N7X2 389 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 TRGV9Q99603 122 aa8.68□□□□□ -1.02
TNFAIP3-201ENST00000237289 ELOA3CA0A087WX78 387 aaPredicted RBP8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 UMAD1C9J7I0 102 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 EGR2P11161 476 aaPredicted RBP8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 GATA2P23769 480 aaPredicted RBP8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 TREML4Q6UXN2 200 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 WFDC3Q8IUB2 231 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 OR11H4Q8NGC9 324 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 RNF125Q96EQ8 232 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 NPCDR1Q9BY65 106 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 TIMM9Q9Y5J7 89 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 FNDC10F2Z333 226 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 K7EIM0 57 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 PSG1P11464 419 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 PPIFP30405 207 aaKnown RBP8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 SERF2P84101 59 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 LGALSLQ3ZCW2 172 aaPredicted RBP8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 ASPHD1Q5U4P2 390 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 C4orf3Q8WVX3 66 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 FNDC4Q9H6D8 234 aaPredicted RBP8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 WDR83OSQ9Y284 106 aa8.67□□□□□ -1.02
TNFAIP3-201ENST00000237289 OVOL1O14753 267 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 FAM74A1Q5RGS3 127 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 LCN15Q6UWW0 184 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 Q8N2B8 174 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 RNF141Q8WVD5 230 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 I3L2K1 104 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 M0R036 132 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 HBE1P02100 147 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 CXCL2P19875 107 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 PSMB8P28062 276 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 TFPI2P48307 235 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 CDC34P49427 236 aaPredicted RBP8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 TOR2AQ5JU69 321 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 TMEM116Q8NCL8 245 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 ZNF502Q8TBZ5 544 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 TECRQ9NZ01 308 aaKnown RBP8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 SLC45A2Q9UMX9 530 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 IGHV3-66A0A0C4DH42 116 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 HOXD3P31249 432 aaPredicted RBP8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 KRTAP24-1Q3LI83 254 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 GATAD1Q8WUU5 269 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 ARV1Q9H2C2 271 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 ZNF580Q9UK33 172 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 M6PRP20645 277 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 RAB5CP51148 216 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 ZNF90Q03938 601 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 ARL16Q0P5N6 197 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 STXBP6Q8NFX7 210 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 CMTM2Q8TAZ6 248 aa8.66□□□□□ -1.02
TNFAIP3-201ENST00000237289 HIVEP1P15822 2718 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 RNF222A6NCQ9 220 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 HELTA6NFD8 242 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 CGB1A6NKQ9 187 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 MYCNOSP40205 109 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 CRIP2P52943 208 aaPredicted RBP8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 GPR61Q9BZJ8 451 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 A0A1B0GW64 132 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 RAB19A4D1S5 217 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 TOMM40O96008 361 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 IGLV1-40P01703 118 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 YPEL3P61236 119 aaPredicted RBP8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 BPIFA4PQ86YQ2 179 aa8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
TNFAIP3-201ENST00000237289 NDUFA4O00483 81 aa8.65□□□□□ -1.03
TNFAIP3-201ENST00000237289 HMGB3O15347 200 aaKnown RBP8.65□□□□□ -1.03
TNFAIP3-201ENST00000237289 LYL1P12980 280 aa8.65□□□□□ -1.03
TNFAIP3-201ENST00000237289 RPL7P18124 248 aaKnown RBP8.65□□□□□ -1.03
TNFAIP3-201ENST00000237289 CSN1S1P47710 185 aa8.65□□□□□ -1.03
TNFAIP3-201ENST00000237289 ZNF343Q6P1L6 599 aa8.65□□□□□ -1.03
TNFAIP3-201ENST00000237289 MCRIP2Q9BUT9 160 aaKnown RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms