RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PPDPFQ9H3Y8 114 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 MRPS17Q9Y2R5 130 aaKnown RBP10.54□□□□□ -0.72
MSH2-201ENST00000233146 KLF13Q9Y2Y9 288 aaPredicted RBP10.54□□□□□ -0.72
MSH2-201ENST00000233146 PCSK5Q92824 1860 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 TET2Q6N021 2002 aaPredicted RBP10.54□□□□□ -0.72
MSH2-201ENST00000233146 LINC00473A8K010 186 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 MEOX1P50221 254 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 LINC00205P59089 165 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 PRSS3P2Q8NHM4 247 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 IGHV3-15A0A0B4J1V0 119 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 SRRM4A7MD48 611 aaKnown RBP10.53□□□□□ -0.72
MSH2-201ENST00000233146 HAX1O00165 279 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 C8orf88P0DMB2 117 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 LINC00322Q6ZN03 302 aaPredicted RBP10.53□□□□□ -0.72
MSH2-201ENST00000233146 ZNF329Q86UD4 541 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 OR9G1Q8NH87 305 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 SLC25A33Q9BSK2 321 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 TRBV25-1A0A075B6N4 114 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 IGKV2D-26A0A0A0MRZ7 120 aa10.53□□□□□ -0.72
MSH2-201ENST00000233146 LOXL1Q08397 574 aaPredicted RBP10.53□□□□□ -0.72
MSH2-201ENST00000233146 LRP4O75096 1905 aa10.52□□□□□ -0.72
MSH2-201ENST00000233146 CNTRLQ7Z7A1 2325 aa10.52□□□□□ -0.72
MSH2-201ENST00000233146 ADAMTS20P59510 1910 aa10.52□□□□□ -0.72
MSH2-201ENST00000233146 SRYQ05066 204 aa10.52□□□□□ -0.73
MSH2-201ENST00000233146 PSMG4Q5JS54 123 aa10.52□□□□□ -0.73
MSH2-201ENST00000233146 PPDPFLQ8WWR9 84 aa10.52□□□□□ -0.73
MSH2-201ENST00000233146 MPV17P39210 176 aa10.52□□□□□ -0.73
MSH2-201ENST00000233146 FAM53AQ6NSI3 398 aaPredicted RBP10.52□□□□□ -0.73
MSH2-201ENST00000233146 FAM167A-AS1Q96KT0 104 aa10.52□□□□□ -0.73
MSH2-201ENST00000233146 PRDM14Q9GZV8 571 aa10.52□□□□□ -0.73
MSH2-201ENST00000233146 SPANXA1Q9NS26 97 aa10.52□□□□□ -0.73
MSH2-201ENST00000233146 HCFC1P51610 2035 aa10.52□□□□□ -0.73
MSH2-201ENST00000233146 CXCL10P02778 98 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 CD27P26842 260 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 FKBP2P26885 142 aaKnown RBP10.51□□□□□ -0.73
MSH2-201ENST00000233146 PIP4P1Q86T03 277 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 UCN2Q96RP3 112 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 TTTY13Q9BZ97 58 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 HEATR1Q9H583 2144 aaKnown RBP10.51□□□□□ -0.73
MSH2-201ENST00000233146 ASCC3Q8N3C0 2202 aaKnown RBP10.51□□□□□ -0.73
MSH2-201ENST00000233146 VPS13AQ96RL7 3174 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 C19orf71A6NCJ1 209 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 COQ2Q96H96 371 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 RITA1Q96K30 269 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 MLST8Q9BVC4 326 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 KIR2DL4Q99706 377 aa10.51□□□□□ -0.73
MSH2-201ENST00000233146 CABIN1Q9Y6J0 2220 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 SP1P08047 785 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 IFI27P40305 119 aaPredicted RBP10.5□□□□□ -0.73
MSH2-201ENST00000233146 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
MSH2-201ENST00000233146 C5orf47Q569G3 176 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 TRGV8A0A0C4DH27 118 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 IGHV3-20A0A0C4DH32 117 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 TMEM8BA6NDV4 472 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 OVOL3O00110 214 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 P01737 135 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 OR1C1Q15619 314 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 TAL2Q16559 108 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 SLC25A2Q9BXI2 301 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 ZNF492Q9P255 531 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 DKK2Q9UBU2 259 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 TRBV20-1A0A075B6N2 111 aa10.5□□□□□ -0.73
MSH2-201ENST00000233146 PPP1R35Q8TAP8 253 aa10.49□□□□□ -0.73
MSH2-201ENST00000233146 IFI27L1Q96BM0 104 aa10.49□□□□□ -0.73
MSH2-201ENST00000233146 TNRC6BQ9UPQ9 1833 aaKnown RBP10.49□□□□□ -0.73
MSH2-201ENST00000233146 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
MSH2-201ENST00000233146 FAM169BQ8N8A8 192 aa10.49□□□□□ -0.73
MSH2-201ENST00000233146 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
MSH2-201ENST00000233146 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
MSH2-201ENST00000233146 KLF12Q9Y4X4 402 aa10.49□□□□□ -0.73
MSH2-201ENST00000233146 MUC3AQ02505 3323 aa10.49□□□□□ -0.73
MSH2-201ENST00000233146 IGKV1OR2-108A0A075B7D4 117 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 IGHV5-51A0A0C4DH38 117 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 OR2H2O95918 312 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 MORN5Q5VZ52 161 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 GATD1Q8NB37 220 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 OR5AN1Q8NGI8 311 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 RND1Q92730 232 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 PTPRBP23467 1997 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 TEN1Q86WV5 123 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 ITLN1Q8WWA0 313 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 RPEQ96AT9 228 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 AJUBAQ96IF1 538 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 MRPL32Q9BYC8 188 aaKnown RBP10.48□□□□□ -0.73
MSH2-201ENST00000233146 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 WDFY4Q6ZS81 3184 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 TRAV3A0A0B4J244 114 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 IFITM1P13164 125 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 SPINK2P20155 84 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 PCBD1P61457 104 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 PAX8Q06710 450 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 PEAR1Q5VY43 1037 aaPredicted RBP10.48□□□□□ -0.73
MSH2-201ENST00000233146 PTH2Q96A98 100 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 ZMAT4Q9H898 229 aa10.48□□□□□ -0.73
MSH2-201ENST00000233146 CSDC2Q9Y534 153 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms