RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 MORN5Q5VZ52 161 aa17.83■□□□□ 0.44
CDX1-201ENST00000231656 OR4X1Q8NH49 305 aa17.83■□□□□ 0.44
CDX1-201ENST00000231656 TMEM242Q9NWH2 141 aa17.83■□□□□ 0.44
CDX1-201ENST00000231656 MLXQ9UH92 298 aa17.83■□□□□ 0.44
CDX1-201ENST00000231656 MDFIC2A0A1B0GVS7 189 aa17.82■□□□□ 0.44
CDX1-201ENST00000231656 TSPAN9O75954 239 aa17.82■□□□□ 0.44
CDX1-201ENST00000231656 RAB5AP20339 215 aa17.82■□□□□ 0.44
CDX1-201ENST00000231656 ADIRFQ15847 76 aa17.82■□□□□ 0.44
CDX1-201ENST00000231656 DEFB112Q30KQ8 113 aa17.82■□□□□ 0.44
CDX1-201ENST00000231656 ZNF562Q6V9R5 426 aa17.82■□□□□ 0.44
CDX1-201ENST00000231656 FAM103A1Q9BTL3 118 aaKnown RBP17.82■□□□□ 0.44
CDX1-201ENST00000231656 SLC25A2Q9BXI2 301 aa17.82■□□□□ 0.44
CDX1-201ENST00000231656 DOK5Q9P104 306 aa17.82■□□□□ 0.44
CDX1-201ENST00000231656 NDUFB4O95168 129 aa17.81■□□□□ 0.44
CDX1-201ENST00000231656 C10orf113Q5VZT2 155 aa17.81■□□□□ 0.44
CDX1-201ENST00000231656 OR7C2O60412 319 aa17.81■□□□□ 0.44
CDX1-201ENST00000231656 CX3CL1P78423 397 aa17.81■□□□□ 0.44
CDX1-201ENST00000231656 NDPQ00604 133 aa17.81■□□□□ 0.44
CDX1-201ENST00000231656 ASPHD1Q5U4P2 390 aa17.81■□□□□ 0.44
CDX1-201ENST00000231656 SETXQ7Z333 2677 aaKnown RBP17.8■□□□□ 0.44
CDX1-201ENST00000231656 TRAV5A0A0B4J249 113 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 SCO2A0A1W2PP80 73 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 H3BUX3 64 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 ELOBQ15370 118 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 ZNF343Q6P1L6 599 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 TEX29Q8N6K0 151 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 OR1L6Q8NGR2 347 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 ARPC1AQ92747 370 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 C11orf52Q96A22 123 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 DERL1Q9BUN8 251 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 CTDSP1Q9GZU7 261 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 YAE1D1Q9NRH1 226 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 C1RLQ9NZP8 487 aa17.8■□□□□ 0.44
CDX1-201ENST00000231656 K7EIM0 57 aa17.79■□□□□ 0.44
CDX1-201ENST00000231656 IL17RELQ6ZVW7 336 aa17.79■□□□□ 0.44
CDX1-201ENST00000231656 TMEM219Q86XT9 240 aa17.79■□□□□ 0.44
CDX1-201ENST00000231656 Q8N9W7 124 aa17.79■□□□□ 0.44
CDX1-201ENST00000231656 NPIPB5A8MRT5 1133 aa17.79■□□□□ 0.44
CDX1-201ENST00000231656 Q8WTZ3 238 aa17.79■□□□□ 0.44
CDX1-201ENST00000231656 GSX1Q9H4S2 264 aaPredicted RBP17.79■□□□□ 0.44
CDX1-201ENST00000231656 ZNF355PQ9NSJ1 428 aa17.79■□□□□ 0.44
CDX1-201ENST00000231656 PRELID1Q9Y255 219 aa17.79■□□□□ 0.44
CDX1-201ENST00000231656 ELOA3CA0A087WX78 387 aaPredicted RBP17.78■□□□□ 0.44
CDX1-201ENST00000231656 CLDN34H7C241 214 aa17.78■□□□□ 0.44
CDX1-201ENST00000231656 IGLC1P0CG04 106 aa17.78■□□□□ 0.44
CDX1-201ENST00000231656 OR5AU1Q8NGC0 362 aa17.78■□□□□ 0.44
CDX1-201ENST00000231656 RBM14Q96PK6 669 aaKnown RBP17.78■□□□□ 0.44
CDX1-201ENST00000231656 UHRF2Q96PU4 802 aa17.78■□□□□ 0.44
CDX1-201ENST00000231656 OR10J4P0C629 311 aa17.77■□□□□ 0.44
CDX1-201ENST00000231656 SMR3AQ99954 134 aa17.77■□□□□ 0.44
CDX1-201ENST00000231656 ANK3Q12955 4377 aaKnown RBP17.76■□□□□ 0.43
CDX1-201ENST00000231656 CXCL1P09341 107 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 PLP1P60201 277 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 LY6EQ16553 131 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 TTC9CQ8N5M4 171 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 URGCP-MRPS24S4R325 110 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 IGHV7-81A0A0B4J1V7 117 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 A6NDX4 124 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 C16orf82Q7Z2V1 217 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 LINC01551Q86U37 167 aa17.76■□□□□ 0.43
CDX1-201ENST00000231656 ZNF48Q96MX3 618 aaPredicted RBP17.76■□□□□ 0.43
CDX1-201ENST00000231656 TRBV20OR9-2A0A075B6H5 130 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 IGLV11-55A0A075B6I3 123 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 A0A1W2PRE2 83 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 HLA-DRB1P01911 266 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 EGR2P11161 476 aaPredicted RBP17.75■□□□□ 0.43
CDX1-201ENST00000231656 IER3P46695 156 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 LINC00305Q7Z4B0 112 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 OR1B1Q8NGR6 318 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 FANCD2OSQ96PS1 177 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 RASL11BQ9BPW5 248 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 MOB4Q9Y3A3 225 aa17.75■□□□□ 0.43
CDX1-201ENST00000231656 C1orf196B1AJZ1 125 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 GGTLC3B5MD39 225 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 IGHV4-59P01825 116 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 ORM2P19652 201 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 UBE2L3P68036 154 aaKnown RBP17.74■□□□□ 0.43
CDX1-201ENST00000231656 ZFP82Q8N141 532 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 C5orf56Q8N8D9 126 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 PRDM13Q9H4Q3 707 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 PITPNC1Q9UKF7 332 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 HIVEP1P15822 2718 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 TGIF2-C20orf24A0A0A6YYL0 155 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 HYPMO75409 117 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 SRP14P37108 136 aaKnown RBP17.74■□□□□ 0.43
CDX1-201ENST00000231656 RAB5BP61020 215 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 TIGITQ495A1 244 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 Q6YL49 198 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 PAXXQ9BUH6 204 aa17.74■□□□□ 0.43
CDX1-201ENST00000231656 IGKV1-17P01599 117 aa17.73■□□□□ 0.43
CDX1-201ENST00000231656 PYYP10082 97 aa17.73■□□□□ 0.43
CDX1-201ENST00000231656 PSG1P11464 419 aa17.73■□□□□ 0.43
CDX1-201ENST00000231656 FXYD5Q96DB9 178 aa17.73■□□□□ 0.43
CDX1-201ENST00000231656 OR51M1Q9H341 326 aa17.73■□□□□ 0.43
CDX1-201ENST00000231656 MTORP42345 2549 aa17.72■□□□□ 0.43
CDX1-201ENST00000231656 LY6G6DO95868 133 aa17.72■□□□□ 0.43
CDX1-201ENST00000231656 AMY1AP04745 511 aa17.72■□□□□ 0.43
CDX1-201ENST00000231656 C1QL4Q86Z23 238 aa17.72■□□□□ 0.43
CDX1-201ENST00000231656 ANAPC16Q96DE5 110 aa17.72■□□□□ 0.43
CDX1-201ENST00000231656 TMUB1Q9BVT8 246 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms