RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ZNF137PP52743 207 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 ERHP84090 104 aaKnown RBP9.97□□□□□ -0.81
NUP88-201ENST00000225696 UBE2V1Q13404 147 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 RASL11AQ6T310 242 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 MUC15Q8N387 334 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 ZNF430Q9H8G1 570 aaPredicted RBP9.97□□□□□ -0.81
NUP88-201ENST00000225696 EPDR1Q9UM22 224 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 CACNA1HO95180 2353 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 SLC25A5P05141 298 aaKnown RBP9.97□□□□□ -0.81
NUP88-201ENST00000225696 CEACAM8P31997 349 aaPredicted RBP9.97□□□□□ -0.81
NUP88-201ENST00000225696 MPV17L2Q567V2 206 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 ZNF596Q8TC21 504 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 PGLYRP4Q96LB8 373 aa9.97□□□□□ -0.81
NUP88-201ENST00000225696 GSX1Q9H4S2 264 aaPredicted RBP9.97□□□□□ -0.81
NUP88-201ENST00000225696 DCHS2Q6V1P9 2916 aa9.96□□□□□ -0.81
NUP88-201ENST00000225696 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
NUP88-201ENST00000225696 FOXE3Q13461 319 aa9.96□□□□□ -0.82
NUP88-201ENST00000225696 HCP5Q6MZN7 132 aa9.96□□□□□ -0.82
NUP88-201ENST00000225696 OR5AN1Q8NGI8 311 aa9.96□□□□□ -0.82
NUP88-201ENST00000225696 OR1B1Q8NGR6 318 aa9.96□□□□□ -0.82
NUP88-201ENST00000225696 OSR1Q8TAX0 266 aaPredicted RBP9.96□□□□□ -0.82
NUP88-201ENST00000225696 ASCL2Q99929 193 aa9.96□□□□□ -0.82
NUP88-201ENST00000225696 MLST8Q9BVC4 326 aa9.96□□□□□ -0.82
NUP88-201ENST00000225696 GVINP1Q7Z2Y8 2422 aa9.96□□□□□ -0.82
NUP88-201ENST00000225696 TPRP12270 2363 aaKnown RBP9.95□□□□□ -0.82
NUP88-201ENST00000225696 TRAV8-1A0A0A6YYK1 113 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 OR4C46A6NHA9 309 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 IGLV2-23P01705 113 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 HIST1H1EP10412 219 aaKnown RBP9.95□□□□□ -0.82
NUP88-201ENST00000225696 MRGPRG-AS1Q2M3A8 158 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 FAM169BQ8N8A8 192 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 ZNF738Q8NE65 137 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 FLYWCH2Q96CP2 140 aaKnown RBP9.95□□□□□ -0.82
NUP88-201ENST00000225696 TMEM70Q9BUB7 260 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 AKAP13Q12802 2813 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 IGHV1-69-2A0A0G2JMI3 117 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 A0A1W2PPI3 338 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 FAM87AP0C7U9 286 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 ATP5IP56385 69 aaPredicted RBP9.95□□□□□ -0.82
NUP88-201ENST00000225696 PRB3Q04118 309 aaPredicted RBP9.95□□□□□ -0.82
NUP88-201ENST00000225696 FAM27E3Q08E93 113 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 TMEM200BQ69YZ2 307 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 PDPNQ86YL7 162 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 RBMXL3Q8N7X1 1067 aaKnown RBP9.95□□□□□ -0.82
NUP88-201ENST00000225696 PRSS22Q9GZN4 317 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 RAB9BQ9NP90 201 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 LRBAP50851 2863 aa9.95□□□□□ -0.82
NUP88-201ENST00000225696 IGHV3-72A0A0B4J1Y9 119 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 TM4SF5O14894 197 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 SLC25A17O43808 307 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 APOA2P02652 100 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 DLX1P56177 255 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 HBBP68871 147 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 TMEM177Q53S58 311 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 TIMM23BQ5SRD1 257 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 OR1L4Q8NGR5 311 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 PMCHL2Q9BQD1 86 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 RPP21Q9H633 154 aaKnown RBP9.94□□□□□ -0.82
NUP88-201ENST00000225696 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 FAM215AQ9Y5M1 114 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 RELNP78509 3460 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 PIEZO2Q9H5I5 2752 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 TRAV17A0A0B4J275 112 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 hADV38S2A0JD32 116 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 SYS1-DBNDD2H3BUS1 97 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 TOX4O94842 621 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 FBLN7Q53RD9 439 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 IGFL2Q6UWQ7 119 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 THAP8Q8NA92 274 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 TMEM167AQ8TBQ9 72 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 GPR82Q96P67 336 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 LINC00312Q9Y6C7 94 aa9.94□□□□□ -0.82
NUP88-201ENST00000225696 C19orf71A6NCJ1 209 aa9.93□□□□□ -0.82
NUP88-201ENST00000225696 MBD3L4A6NDZ8 208 aaPredicted RBP9.93□□□□□ -0.82
NUP88-201ENST00000225696 MBD3L3A6NE82 208 aaPredicted RBP9.93□□□□□ -0.82
NUP88-201ENST00000225696 MBD3L5A6NJ08 208 aaPredicted RBP9.93□□□□□ -0.82
NUP88-201ENST00000225696 H0Y8G0 127 aa9.93□□□□□ -0.82
NUP88-201ENST00000225696 CRXO43186 299 aaPredicted RBP9.93□□□□□ -0.82
NUP88-201ENST00000225696 NBEAP1P0C6P0 100 aa9.93□□□□□ -0.82
NUP88-201ENST00000225696 BPIFB3P59826 476 aa9.93□□□□□ -0.82
NUP88-201ENST00000225696 MBD3L2Q8NHZ7 208 aaPredicted RBP9.93□□□□□ -0.82
NUP88-201ENST00000225696 IGHV2-70DA0A0C4DH43 119 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 OVOL3O00110 214 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 TNFSF4P23510 183 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 ATP5L2Q7Z4Y8 100 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 CIARTQ8N365 385 aaPredicted RBP9.92□□□□□ -0.82
NUP88-201ENST00000225696 OR4C13Q8NGP0 309 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
NUP88-201ENST00000225696 ZNF785A8K8V0 405 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 INS-IGF2F8WCM5 200 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 NUDT3O95989 172 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 LTAP01374 205 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 GP9P14770 177 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 CNTFRP26992 372 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 TEX36Q5VZQ5 186 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 LYPD2Q6UXB3 125 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 OR10X1Q8NGY0 326 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 WASHC3Q9Y3C0 194 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 POLEQ07864 2286 aa9.92□□□□□ -0.82
NUP88-201ENST00000225696 TAX1BP3O14907 124 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms