RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
NOD1-201ENST00000222823 TMEM200BQ69YZ2 307 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 RPP25LQ8N5L8 163 aaKnown RBP9.48□□□□□ -0.89
NOD1-201ENST00000222823 PRDM13Q9H4Q3 707 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 IGHV2-26A0A0B4J1V2 119 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 LY6G6EA0A0G2JKS1 128 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 IGHV1-8P0DP01 117 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 MYOD1P15172 320 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 TCF23Q7RTU1 214 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 LYPD6Q86Y78 171 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 U3KQA8 63 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 SERF1AO75920 110 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 PLP1P60201 277 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 ZNF418Q8TF45 676 aaPredicted RBP9.48□□□□□ -0.89
NOD1-201ENST00000222823 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 SONP18583 2426 aaKnown RBP9.48□□□□□ -0.89
NOD1-201ENST00000222823 STAG3L3P0CL85 134 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 TEX38Q6PEX7 206 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 PMCHL2Q9BQD1 86 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 ZNF581Q9P0T4 197 aa9.48□□□□□ -0.89
NOD1-201ENST00000222823 TRBV6-6A0A0A6YYG2 114 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 TRAV40A0A0B4J280 105 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 NPFFO15130 113 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 MLNRO43193 412 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 JOSD1Q15040 202 aaPredicted RBP9.47□□□□□ -0.89
NOD1-201ENST00000222823 SAMD13Q5VXD3 122 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 PRSS22Q9GZN4 317 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 HGFACQ04756 655 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 FAM71F2Q6NXP2 309 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 TMEM14EPQ6UXP3 125 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 TMEM170AQ8WVE7 144 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 COQ2Q96H96 371 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 DUX3Q96PT4 197 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 SCGB3A1Q96QR1 104 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 LINC00527Q9UJ94 153 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 PLCE1Q9P212 2302 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 Q6P435 159 aa9.47□□□□□ -0.89
NOD1-201ENST00000222823 SSBP4Q9BWG4 385 aaPredicted RBP9.47□□□□□ -0.89
NOD1-201ENST00000222823 A0A0G2JNJ9 132 aa9.46□□□□□ -0.89
NOD1-201ENST00000222823 Q9UFV3 132 aa9.46□□□□□ -0.89
NOD1-201ENST00000222823 CSPG4Q6UVK1 2322 aa9.46□□□□□ -0.89
NOD1-201ENST00000222823 TRAV1-1A0A0B4J248 108 aa9.46□□□□□ -0.89
NOD1-201ENST00000222823 IGLV3-1P01715 115 aa9.46□□□□□ -0.89
NOD1-201ENST00000222823 RNASE4P34096 147 aaKnown RBP9.46□□□□□ -0.89
NOD1-201ENST00000222823 EFNA4P52798 201 aa9.46□□□□□ -0.89
NOD1-201ENST00000222823 NRN1Q9NPD7 142 aa9.46□□□□□ -0.89
NOD1-201ENST00000222823 TRAV5A0A0B4J249 113 aa9.46□□□□□ -0.9
NOD1-201ENST00000222823 ZNF474Q6S9Z5 364 aaPredicted RBP9.46□□□□□ -0.9
NOD1-201ENST00000222823 NUP37Q8NFH4 326 aa9.46□□□□□ -0.9
NOD1-201ENST00000222823 C8orf46Q8TAG6 207 aa9.46□□□□□ -0.9
NOD1-201ENST00000222823 GLMPQ8WWB7 406 aa9.46□□□□□ -0.9
NOD1-201ENST00000222823 PROK2Q9HC23 129 aa9.46□□□□□ -0.9
NOD1-201ENST00000222823 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.9
NOD1-201ENST00000222823 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 TRAV3A0A0B4J244 114 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 LINC00473A8K010 186 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 SNAI2O43623 268 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BKO60814 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BJP06899 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 PAX1P15863 534 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BOP23527 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BBP33778 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BDP58876 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BCP62807 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST2H2BEQ16778 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.45□□□□□ -0.9
NOD1-201ENST00000222823 Q6ZS49 121 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BHQ93079 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BNQ99877 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 HIST1H2BMQ99879 126 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 FOXC2Q99958 501 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 WNT2P09544 360 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 RSPO1Q2MKA7 263 aaPredicted RBP9.45□□□□□ -0.9
NOD1-201ENST00000222823 LINC01587Q99440 93 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 PARD6GQ9BYG4 376 aaPredicted RBP9.45□□□□□ -0.9
NOD1-201ENST00000222823 YAE1D1Q9NRH1 226 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 DOCK11Q5JSL3 2073 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 IGKV1D-17A0A075B6S4 117 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 IGHV1-3A0A0C4DH29 117 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 TMEM262E9PQX1 116 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 TMEM50AO95807 157 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 PSG1P11464 419 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 ADCYAP1P18509 176 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 TMEM131Q92545 1883 aa9.45□□□□□ -0.9
NOD1-201ENST00000222823 KIR3DL3Q8N743 410 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 TRBV24-1A0A075B6N3 115 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 A0A1W2PRX2 142 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 PMS2P5A8MQ11 134 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
NOD1-201ENST00000222823 CD7P09564 240 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 PAX8Q06710 450 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 COPS9Q8WXC6 57 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 ST6GALNAC6Q969X2 333 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 AGMATQ9BSE5 352 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
NOD1-201ENST00000222823 GSN-AS1Q9NRJ2 163 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 PEMTQ9UBM1 199 aa9.44□□□□□ -0.9
NOD1-201ENST00000222823 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
NOD1-201ENST00000222823 LINC00205P59089 165 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms