RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ESDP10768 282 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 UBE2V1Q13404 147 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 DTX2Q86UW9 622 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 C14orf144Q96I85 54 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 TRBV20-1A0A075B6N2 111 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 FAM223BA6NKX1 122 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 SUMO2P61956 95 aaKnown RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 C17orf82Q86X59 251 aaPredicted RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 FAM223AQ8IWN6 122 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 GGTLC1Q9BX51 225 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 TGFBR3LH3BV60 316 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 IGHV1-2P23083 117 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 KLRB1Q12918 225 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 FAM90A2PQ658T7 463 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 FBXL7Q9UJT9 491 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 WNK1Q9H4A3 2382 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 CELA2AP08217 269 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 PF4V1P10720 104 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 MDKP21741 143 aaPredicted RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 PRSS12P56730 875 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 ATXN8Q156A1 80 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 IFI27L1Q96BM0 104 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 DMRTA2Q96SC8 542 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 MRPL20Q9BYC9 149 aaKnown RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 C11orf68Q9H3H3 251 aaKnown RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 NDUFB8O95169 186 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 BSPH1Q075Z2 132 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 KLF17Q5JT82 389 aaPredicted RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 NEGR1Q7Z3B1 354 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 BCL6BQ8N143 479 aaPredicted RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 LRP4O75096 1905 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 DLEU1O43261 78 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 WNT2P09544 360 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 OR9G9P0C7N8 305 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 SRSF3P84103 164 aaKnown RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 KIAA1644Q3SXP7 199 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 TPRX1Q8N7U7 411 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 OCC1Q8TAD7 63 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 USMG5Q96IX5 58 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 LINC00477Q96M19 166 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 RNASE7Q9H1E1 156 aaKnown RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 TRAV8-6A0A0B4J262 113 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 PLAUP00749 431 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 TRGV3P03979 118 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 COX6B1P14854 86 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 LCNL1Q6ZST4 164 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 ATOH7Q8N100 152 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 ANAPC13Q9BS18 74 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 ANKRD17O75179 2603 aaKnown RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 IGKV1D-13A0A0B4J2D9 117 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 A8MWP6 167 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 H7C2G1 150 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 CD5LO43866 347 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 IGKV1-13P0DP09 117 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 FAM231DQ6ZW35 169 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 ZNRF1Q8ND25 227 aa3.66□□□□□ -1.82
CHD9-201ENST00000219084 RNASE6Q93091 150 aaKnown RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 MBNL3Q9NUK0 354 aaKnown RBP3.66□□□□□ -1.82
CHD9-201ENST00000219084 IGKV1D-43A0A0B4J1Z2 117 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 SIVA1O15304 175 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 IGKV1D-33P01593 117 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 IGKV1-33P01594 117 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 IGHG3P01860 377 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 APELAP0DMC3 54 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 FREM1Q5H8C1 2179 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 SYS1-DBNDD2H3BUS1 97 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 CDCP2Q5VXM1 449 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 GGNQ86UU5 652 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 TMEM167AQ8TBQ9 72 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 PCDH15Q96QU1 1955 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 SPTBN2O15020 2390 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 PRR19A6NJB7 356 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 ZFP36L1Q07352 338 aaKnown RBP3.65□□□□□ -1.82
CHD9-201ENST00000219084 PSG3Q16557 428 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 ZNF562Q6V9R5 426 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 SIGLEC15Q6ZMC9 328 aa3.65□□□□□ -1.82
CHD9-201ENST00000219084 ZNF418Q8TF45 676 aaPredicted RBP3.65□□□□□ -1.82
CHD9-201ENST00000219084 CSRP2Q16527 193 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 CHAC1Q9BUX1 264 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 PSG8Q9UQ74 426 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 RIF1Q5UIP0 2472 aaKnown RBP3.65□□□□□ -1.83
CHD9-201ENST00000219084 IGHV3-21A0A0B4J1V1 117 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 CLPSP04118 112 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 LGALS1P09382 135 aaKnown RBP3.65□□□□□ -1.83
CHD9-201ENST00000219084 GATA4P43694 442 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 TMEM86BQ8N661 226 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 LYPD6BQ8NI32 183 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 ZNF479Q96JC4 524 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 PLSCR4Q9NRQ2 329 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 TMEM14BQ9NUH8 114 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 COX11Q9Y6N1 276 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 NKX2-8O15522 239 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 CXCL1P09341 107 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 GZMBP10144 247 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 TMEM141Q96I45 108 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 RPUSD1Q9UJJ7 312 aaKnown RBP3.65□□□□□ -1.83
CHD9-201ENST00000219084 HIVEP2P31629 2446 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 F8W1H4 67 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 SP9P0CG40 484 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms