RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Cyb561d1A2AE42 229 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Zcchc24B2RVL6 241 aaKnown RBP13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Vmn1r180B9EK86 305 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Mmp27D3YV89 551 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr117L7N1Z1 317 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 P06335 190 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Zfp941Q3URY5 674 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Cd200r4Q6XJV4 270 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr874Q7TRE6 310 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr193Q7TS43 309 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Rnf170Q8CBG9 286 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Klf17Q8CFA7 341 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Prodh2Q8VCZ9 456 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr130Q8VFC1 317 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr136Q8VG72 312 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Smim8Q9CQQ0 97 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Plekha2Q9ERS5 425 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Psmb3Q9R1P1 205 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr418A0A140T8J6 310 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1150-ps1A0A1L1STL1 316 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1331K7N684 317 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Dlx1Q64317 255 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1333Q7TQV7 317 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 9430097D07RikQ8BS47 195 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Slc35e1Q8CD26 409 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Hspa12aQ8K0U4 675 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Lrrc10Q8K3W2 274 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr530Q8VFE8 307 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1141Q8VFQ7 311 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Rnf7Q9WTZ1 113 aa13.2□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1291-ps1A0A286YE47 326 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr739E9Q1P0 309 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr427E9Q7E7 315 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm43191F6YIH5 235 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm2381G3UY53 305 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Fcer1gP20491 86 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Rab5cP35278 216 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Trim63Q38HM4 350 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Cd300lbQ3U497 209 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Calm5Q6W3E0 140 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Lrtm2Q8BGX3 370 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gemin8Q8BHE1 238 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Dctn4Q8CBY8 467 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1297Q8VGE8 312 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr979Q8VH10 311 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Herpud1Q9JJK5 391 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Dscaml1Q4VA61 2053 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Nsun4C4P6S0 806 aaKnown RBP13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Iqcf6G3UWF2 157 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Rdh16O54909 317 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Lin7cO88952 197 aaKnown RBP13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Slc6a9P28571 692 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm20816Q5FWD4 227 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Cdc42ep3Q9CQC5 254 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Barx1Q9ER42 254 aa13.19□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm21719J3KMI9 230 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Chek1O35280 476 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Mrps21P58059 87 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Tmem40Q4FJU9 225 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Fam222bQ6P539 562 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Prr15Q9D1T5 122 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Lurap1Q9D6I9 239 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 RetnlaQ9EP95 111 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 TncQ80YX1 2110 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Kcnk15B2RVL1 343 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr906K7N5P3 311 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Hmgb3O54879 200 aaKnown RBP13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Hist1h1bP43276 223 aaKnown RBP13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1362Q5SZZ8 308 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Phox2aQ62066 280 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Lax1Q8BHB3 407 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1448Q8VFX1 314 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr167Q8VGJ5 312 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Tpsg1Q9QUL7 311 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Sumo3Q9Z172 110 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm45871A0A1B0GRI9 540 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 P01649 108 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Ifna6P07350 189 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Lef1P27782 397 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Mettl4Q3U034 471 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Trav6d-4Q5R1I0 115 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr1099Q8VG37 312 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 GgactQ923B0 149 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Coa3Q9D2R6 108 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Aifm1Q9Z0X1 612 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Map1aQ9QYR6 2776 aa13.18□□□□□ -0.3
Trim39-203ENSMUST00000113706 Lrrc3cA0A1B0GRI5 255 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gm10269G3UWD7 123 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Rpl30P62889 115 aaKnown RBP13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Sft2d1Q5SSN7 159 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Msrb2Q78J03 175 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Lamp5Q9D387 280 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Bola1Q9D8S9 137 aaKnown RBP13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Cd200r1Q9ES57 326 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Prss1Q9Z1R9 246 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Usf3B2RUQ2 2221 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Olfr62L7MU75 315 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Gpr33O88416 339 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 Ifitm5O88728 134 aa13.17□□□□□ -0.3
Trim39-203ENSMUST00000113706 StumQ0VBF8 141 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms