RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 ZNF846Q147U1 533 aa12.96□□□□□ -0.33
PHGDH-227ENST00000641811 SLC16A13Q7RTY0 426 aa12.96□□□□□ -0.33
PHGDH-227ENST00000641811 U3KQK5 164 aa12.96□□□□□ -0.33
PHGDH-227ENST00000641811 IGHV3-66A0A0C4DH42 116 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 TSPAN4O14817 238 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 MED6O75586 246 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 IFNA21P01568 189 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 OR10J1P30954 320 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 IFITM3Q01628 133 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 LAMTOR1Q6IAA8 161 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 ETFRF1Q6IPR1 90 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 LILRB2Q8N423 598 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 MITD1Q8WV92 249 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 SEC22CQ9BRL7 303 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 GINS3Q9BRX5 216 aa12.95□□□□□ -0.34
PHGDH-227ENST00000641811 WDR12Q9GZL7 423 aaKnown RBP12.95□□□□□ -0.34
PHGDH-227ENST00000641811 PAIP2BQ9ULR5 123 aaKnown RBP12.95□□□□□ -0.34
PHGDH-227ENST00000641811 TRAV30A0A087WSZ9 112 aa12.94□□□□□ -0.34
PHGDH-227ENST00000641811 FAM240BA0A1B0GVZ2 78 aa12.94□□□□□ -0.34
PHGDH-227ENST00000641811 ASAH1Q13510 395 aa12.94□□□□□ -0.34
PHGDH-227ENST00000641811 HAGHQ16775 308 aa12.94□□□□□ -0.34
PHGDH-227ENST00000641811 OR1S2Q8NGQ3 325 aa12.94□□□□□ -0.34
PHGDH-227ENST00000641811 ST8SIA2Q92186 375 aa12.94□□□□□ -0.34
PHGDH-227ENST00000641811 SPAG8Q99932 426 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-227ENST00000641811 SRD5A3Q9H8P0 318 aa12.94□□□□□ -0.34
PHGDH-227ENST00000641811 IGKV3-7A0A075B6H7 116 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 RBMY1BA6NDE4 496 aaKnown RBP12.93□□□□□ -0.34
PHGDH-227ENST00000641811 RBMY1EA6NEQ0 496 aaKnown RBP12.93□□□□□ -0.34
PHGDH-227ENST00000641811 SCGB2A1O75556 95 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 UPK1BO75841 260 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 H2AFB2P0C5Z0 115 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 RBMY1DP0C7P1 496 aaKnown RBP12.93□□□□□ -0.34
PHGDH-227ENST00000641811 ATP5IP56385 69 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-227ENST00000641811 POLR2GP62487 172 aaKnown RBP eCLIP12.93□□□□□ -0.34
PHGDH-227ENST00000641811 ID3Q02535 119 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 MZT2BQ6NZ67 158 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 OR4D5Q8NGN0 318 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 UBQLN2Q9UHD9 624 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 TENM3Q9P273 2699 aa12.93□□□□□ -0.34
PHGDH-227ENST00000641811 H3BP45 60 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 CCSO14618 274 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 NPPCP23582 126 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 TFPI2P48307 235 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 YPEL3P61236 119 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-227ENST00000641811 GAMTQ14353 236 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 IAH1Q2TAA2 248 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-227ENST00000641811 SPANXN5Q5MJ07 72 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 FAM90A2PQ658T7 463 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 LINC00322Q6ZN03 302 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-227ENST00000641811 RCHY1Q96PM5 261 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 CIB3Q96Q77 187 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-227ENST00000641811 TM2D3Q9BRN9 247 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 VSIRQ9H7M9 311 aa12.92□□□□□ -0.34
PHGDH-227ENST00000641811 STAB2Q8WWQ8 2551 aa12.91□□□□□ -0.34
PHGDH-227ENST00000641811 NBEAL2Q6ZNJ1 2754 aa12.91□□□□□ -0.34
PHGDH-227ENST00000641811 GPX4P36969 197 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-227ENST00000641811 NKX2-1P43699 371 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-227ENST00000641811 RAB11AP62491 216 aa12.91□□□□□ -0.34
PHGDH-227ENST00000641811 TCF24Q7RTU0 167 aa12.91□□□□□ -0.34
PHGDH-227ENST00000641811 GBGT1Q8N5D6 347 aa12.91□□□□□ -0.34
PHGDH-227ENST00000641811 ZBTB8BQ8NAP8 495 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-227ENST00000641811 ZNF431Q8TF32 576 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-227ENST00000641811 Q8WTZ3 238 aa12.91□□□□□ -0.34
PHGDH-227ENST00000641811 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
PHGDH-227ENST00000641811 GSKIPQ9P0R6 139 aa12.91□□□□□ -0.34
PHGDH-227ENST00000641811 SSSCA1O60232 199 aa12.9□□□□□ -0.34
PHGDH-227ENST00000641811 DFFBO76075 338 aa12.9□□□□□ -0.34
PHGDH-227ENST00000641811 SCGB1D2O95969 90 aa12.9□□□□□ -0.34
PHGDH-227ENST00000641811 CRYBB3P26998 211 aa12.9□□□□□ -0.34
PHGDH-227ENST00000641811 ODF3L2Q3SX64 289 aa12.9□□□□□ -0.34
PHGDH-227ENST00000641811 SLC35E1Q96K37 410 aa12.9□□□□□ -0.34
PHGDH-227ENST00000641811 METTL26Q96S19 204 aa12.9□□□□□ -0.34
PHGDH-227ENST00000641811 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
PHGDH-227ENST00000641811 IGKV1D-37A0A075B6S9 117 aa12.89□□□□□ -0.35
PHGDH-227ENST00000641811 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
PHGDH-227ENST00000641811 PRSS46E5RG02 174 aa12.89□□□□□ -0.35
PHGDH-227ENST00000641811 IL4P05112 153 aa12.89□□□□□ -0.35
PHGDH-227ENST00000641811 RD3LP0DJH9 198 aa12.89□□□□□ -0.35
PHGDH-227ENST00000641811 PSG1P11464 419 aa12.89□□□□□ -0.35
PHGDH-227ENST00000641811 RPP30P78346 268 aaKnown RBP12.89□□□□□ -0.35
PHGDH-227ENST00000641811 USF2Q15853 346 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-227ENST00000641811 C12orf45Q8N5I9 185 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-227ENST00000641811 PSENENQ9NZ42 101 aa12.89□□□□□ -0.35
PHGDH-227ENST00000641811 STRAPQ9Y3F4 350 aaKnown RBP12.89□□□□□ -0.35
PHGDH-227ENST00000641811 ZFP92A6NM28 416 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 TOMM40O96008 361 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 BMI1P35226 326 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 PAX9P55771 341 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 ZNF90Q03938 601 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 ENKURQ8TC29 256 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 WWC2-AS2Q96NR7 200 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 RETNQ9HD89 108 aa12.88□□□□□ -0.35
PHGDH-227ENST00000641811 MBPP02686 304 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-227ENST00000641811 P2RY1P47900 373 aa12.87□□□□□ -0.35
PHGDH-227ENST00000641811 RPL11P62913 178 aaKnown RBP12.87□□□□□ -0.35
PHGDH-227ENST00000641811 OR51G1Q8NGK1 321 aa12.87□□□□□ -0.35
PHGDH-227ENST00000641811 SMIM8Q96KF7 97 aa12.87□□□□□ -0.35
PHGDH-227ENST00000641811 MS4A6AQ9H2W1 248 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms