RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TMEM256Q8N2U0 113 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 OR2K2Q8NGT1 345 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 PLXNA1Q9UIW2 1896 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 TRAV12-3A0A0B4J271 114 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 CD24P25063 80 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 EFNA2O43921 213 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 NUP37Q8NFH4 326 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 CD7P09564 240 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 HSD52Q0P140 79 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 SAMD5Q5TGI4 173 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 IFI27L1Q96BM0 104 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 SLC50A1Q9BRV3 221 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 TMEM133Q9H2Q1 129 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 RPP25LQ8N5L8 163 aaKnown RBP15.32■□□□□ 0.04
SCARB2-213ENST00000638680 ZIC4Q8N9L1 334 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 SEC11AP67812 179 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 FAM57AQ8TBR7 257 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 LOC102723996A0A087X1L8 192 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 PINLYPA6NC86 204 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 C8orf46Q8TAG6 207 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 NABP1Q96AH0 204 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 LINC01587Q99440 93 aa15.32■□□□□ 0.04
SCARB2-213ENST00000638680 TRAV2A0A0B4J234 112 aa15.31■□□□□ 0.04
SCARB2-213ENST00000638680 ZNF815PA8K554 130 aa15.31■□□□□ 0.04
SCARB2-213ENST00000638680 PAX2Q02962 417 aa15.31■□□□□ 0.04
SCARB2-213ENST00000638680 ZNF479Q96JC4 524 aa15.31■□□□□ 0.04
SCARB2-213ENST00000638680 ALPK2Q86TB3 2170 aa15.31■□□□□ 0.04
SCARB2-213ENST00000638680 NDUFS6O75380 124 aaKnown RBP15.31■□□□□ 0.04
SCARB2-213ENST00000638680 PPBPP02775 128 aa15.31■□□□□ 0.04
SCARB2-213ENST00000638680 NMSQ5H8A3 153 aa15.31■□□□□ 0.04
SCARB2-213ENST00000638680 NEU4Q8WWR8 484 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-213ENST00000638680 MGST2Q99735 147 aa15.31■□□□□ 0.04
SCARB2-213ENST00000638680 IFI27P40305 119 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-213ENST00000638680 DMRTC2Q8IXT2 367 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-213ENST00000638680 DLEU1O43261 78 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 ADCYAP1P18509 176 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 RNF144BQ7Z419 303 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 NAA38Q9BRA0 125 aaKnown RBP15.3■□□□□ 0.04
SCARB2-213ENST00000638680 ANAPC13Q9BS18 74 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 MS4A6AQ9H2W1 248 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 HEATR5BQ9P2D3 2071 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 ERVK11-1P61568 191 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 ZCCHC24Q8N2G6 241 aaKnown RBP15.3■□□□□ 0.04
SCARB2-213ENST00000638680 TEX29Q8N6K0 151 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 SEPSECSQ9HD40 501 aaKnown RBP15.3■□□□□ 0.04
SCARB2-213ENST00000638680 C5orf24Q7Z6I8 188 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 IGKV1-5P01602 117 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 AGMATQ9BSE5 352 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 PRDM6Q9NQX0 595 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 CYSLTR1Q9Y271 337 aa15.3■□□□□ 0.04
SCARB2-213ENST00000638680 MDC1Q14676 2089 aaKnown RBP15.29■□□□□ 0.04
SCARB2-213ENST00000638680 IGHV1-18A0A0C4DH31 117 aa15.29■□□□□ 0.04
SCARB2-213ENST00000638680 FAM166AQ6J272 317 aa15.29■□□□□ 0.04
SCARB2-213ENST00000638680 ORMDL2Q53FV1 153 aa15.29■□□□□ 0.04
SCARB2-213ENST00000638680 LOC285556D6RIA3 1793 aa15.29■□□□□ 0.04
SCARB2-213ENST00000638680 RBMY1BA6NDE4 496 aaKnown RBP15.29■□□□□ 0.04
SCARB2-213ENST00000638680 RBMY1EA6NEQ0 496 aaKnown RBP15.29■□□□□ 0.04
SCARB2-213ENST00000638680 RBMY1DP0C7P1 496 aaKnown RBP15.29■□□□□ 0.04
SCARB2-213ENST00000638680 RBMY1A1P0DJD3 496 aaKnown RBP15.29■□□□□ 0.04
SCARB2-213ENST00000638680 RBMY1CP0DJD4 496 aa15.29■□□□□ 0.04
SCARB2-213ENST00000638680 SLC25A2Q9BXI2 301 aa15.29■□□□□ 0.04
SCARB2-213ENST00000638680 KIR3DL3Q8N743 410 aa15.28■□□□□ 0.04
SCARB2-213ENST00000638680 C5orf63A6NC05 138 aa15.28■□□□□ 0.04
SCARB2-213ENST00000638680 TRAV21A0A0B4J279 112 aa15.28■□□□□ 0.04
SCARB2-213ENST00000638680 FOXG1P55316 489 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-213ENST00000638680 GTSCR1Q86UQ5 136 aa15.28■□□□□ 0.04
SCARB2-213ENST00000638680 TRAV8-4A0A0B4J246 113 aa15.27■□□□□ 0.04
SCARB2-213ENST00000638680 hDV102S1A0JD36 115 aa15.27■□□□□ 0.04
SCARB2-213ENST00000638680 NPIPB5A8MRT5 1133 aa15.27■□□□□ 0.04
SCARB2-213ENST00000638680 FOXF2Q12947 444 aa15.27■□□□□ 0.04
SCARB2-213ENST00000638680 GAGE13Q4V321 117 aa15.27■□□□□ 0.04
SCARB2-213ENST00000638680 BMPERQ8N8U9 685 aa15.27■□□□□ 0.04
SCARB2-213ENST00000638680 KLHDC3Q9BQ90 382 aa15.27■□□□□ 0.04
SCARB2-213ENST00000638680 SPRR3Q9UBC9 169 aa15.27■□□□□ 0.04
SCARB2-213ENST00000638680 GBF1Q92538 1859 aa15.27■□□□□ 0.03
SCARB2-213ENST00000638680 NCR2O95944 276 aa15.27■□□□□ 0.03
SCARB2-213ENST00000638680 D6R8Y8 96 aa15.27■□□□□ 0.03
SCARB2-213ENST00000638680 RHOGP84095 191 aa15.27■□□□□ 0.03
SCARB2-213ENST00000638680 C10orf55Q5SWW7 151 aa15.27■□□□□ 0.03
SCARB2-213ENST00000638680 TMEM14EPQ6UXP3 125 aa15.27■□□□□ 0.03
SCARB2-213ENST00000638680 RNF182Q8N6D2 247 aa15.27■□□□□ 0.03
SCARB2-213ENST00000638680 PNRC2Q9NPJ4 139 aaKnown RBP15.27■□□□□ 0.03
SCARB2-213ENST00000638680 PGPEP1Q9NXJ5 209 aa15.27■□□□□ 0.03
SCARB2-213ENST00000638680 GREB1Q4ZG55 1949 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 IGKV2-40A0A087WW87 121 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-213ENST00000638680 IGKV2D-40P01614 121 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-213ENST00000638680 QRFPP83859 136 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 SRSF4Q08170 494 aaKnown RBP15.26■□□□□ 0.03
SCARB2-213ENST00000638680 LCN12Q6JVE5 192 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 LCTP09848 1927 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 TRAV3A0A0B4J244 114 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 CD300EQ496F6 205 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-213ENST00000638680 EXOC3-AS1Q8N2X6 119 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 PF4P02776 101 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 A8MWV9 139 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 F2Z2F3 143 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 SELENOKQ9Y6D0 94 aa15.26■□□□□ 0.03
SCARB2-213ENST00000638680 IGHV3-64A0A075B6Q5 118 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 TDGF1P13385 188 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 C3orf79P0CE67 100 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms