RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 IGLV11-55A0A075B6I3 123 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 TSPAN4O14817 238 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 PDE6DO43924 150 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 CLN5O75503 358 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 C8orf88P0DMB2 117 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 AKR1C3P42330 323 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 ATP5G3P48201 142 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 LOXL1Q08397 574 aaPredicted RBP9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 PNRC1Q12796 327 aaPredicted RBP9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 CST9LP1Q5W188 147 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 PATE2Q6UY27 113 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 PIFOQ8TCI5 191 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 ZNF503Q96F45 646 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 RBM14Q96PK6 669 aaKnown RBP9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 FANCD2OSQ96PS1 177 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 SMCO4Q9NRQ5 59 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 TMEM167BQ9NRX6 74 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 DOK5Q9P104 306 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 ARL2-SNX15V9GYD0 113 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 ZNF727A8MUV8 499 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 KLF17Q5JT82 389 aaPredicted RBP9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 MORN5Q5VZ52 161 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 C10orf113Q5VZT2 155 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 C5orf56Q8N8D9 126 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 SGMS2Q8NHU3 365 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 SMIM7Q9BQ49 75 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 PARLQ9H300 379 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 MOB4Q9Y3A3 225 aa9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 YTHDF2Q9Y5A9 579 aaKnown RBP9.66□□□□□ -0.86
CACNA1D-228ENST00000638120 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 PTPN13Q12923 2485 aa9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 ELOA3CA0A087WX78 387 aaPredicted RBP9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 F6UZH7 168 aa9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 OR7C2O60412 319 aa9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 AVPP01185 164 aa9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 PLP1P60201 277 aa9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 RPUSD4Q96CM3 377 aaKnown RBP9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 FAM167A-AS1Q96KT0 104 aa9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 GSX1Q9H4S2 264 aaPredicted RBP9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 SDF2L1Q9HCN8 221 aa9.65□□□□□ -0.86
CACNA1D-228ENST00000638120 IGKV1-17P01599 117 aa9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 NPPCP23582 126 aa9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 KIAA0141Q14154 515 aaPredicted RBP9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 SSX3Q99909 188 aa9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 SLC25A2Q9BXI2 301 aa9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 TUBA4BQ9H853 241 aa9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 ZNF355PQ9NSJ1 428 aa9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 NAT8Q9UHE5 227 aa9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 CELSR2Q9HCU4 2923 aa9.64□□□□□ -0.87
CACNA1D-228ENST00000638120 A0A087WWC5 75 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 B4DEV8 164 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 J3QLI3 93 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 ATP6V0E1O15342 81 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 ZNF674Q2M3X9 581 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 Q5PR19 223 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 TMEM219Q86XT9 240 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 OR5AU1Q8NGC0 362 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 OR51G1Q8NGK1 321 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 MBD6Q96DN6 1003 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 ZNF48Q96MX3 618 aaPredicted RBP9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 UHRF2Q96PU4 802 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 THYN1Q9P016 225 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 TRAV5A0A0B4J249 113 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 PSG1P11464 419 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 ORM2P19652 201 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 KLK9Q2XQG4 91 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 TIGITQ495A1 244 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 LINC00305Q7Z4B0 112 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 OR5T1Q8NG75 326 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 OR1B1Q8NGR6 318 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 KLK9Q9UKQ9 250 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 SOX21Q9Y651 276 aaPredicted RBP9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 POLQO75417 2590 aa9.63□□□□□ -0.87
CACNA1D-228ENST00000638120 VPS13CQ709C8 3753 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 HYPMO75409 117 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 AMY1AP04745 511 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 FABP1P07148 127 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 UBE2L3P68036 154 aaKnown RBP9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 ECSCRQ19T08 205 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 TMEM241Q24JQ0 296 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 UNQ5815/PRO19632Q6UWF5 114 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 C15orf54Q8N8G6 183 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 MAPK1IP1LQ8NDC0 245 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 C11orf52Q96A22 123 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 TMEM68Q96MH6 324 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 TMUB1Q9BVT8 246 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 CSMD2Q7Z408 3487 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 ABCA1O95477 2261 aa9.62□□□□□ -0.87
CACNA1D-228ENST00000638120 TENM4Q6N022 2769 aa9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 TRAV30A0A087WSZ9 112 aa9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 SCO2A0A1W2PP80 73 aa9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 A6NDX4 124 aa9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 NDUFB4O95168 129 aa9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 NDUFB8O95169 186 aa9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 OR10J4P0C629 311 aa9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 IGHV4-31P0DP07 118 aa9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 HIST1H1BP16401 226 aaKnown RBP9.61□□□□□ -0.87
CACNA1D-228ENST00000638120 MFAP4P55083 255 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms