RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 DOPEY2Q9Y3R5 2298 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 TCRBV4S1A1TA0A5B7 111 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 MED13LQ71F56 2210 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 TRBV20OR9-2A0A075B6H5 130 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 TRAV8-6A0A0B4J262 113 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 M0R3E3 92 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 LINC00614P0C842 121 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 PRB4P10163 310 aaPredicted RBP13.11□□□□□ -0.31
CLN5-218ENST00000637397 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 NUDT11Q96G61 164 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 CHODLQ9H9P2 273 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 IGHV3-23P01764 117 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 DGAT2L7PQ6IED9 249 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 COLCA1Q6ZS62 124 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 OR1N2Q8NGR9 330 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 METTL26Q96S19 204 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 FAM106CPP0CH98 169 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 LOXL3P58215 753 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 TMEM160Q9NX00 188 aa13.11□□□□□ -0.31
CLN5-218ENST00000637397 TSKUQ8WUA8 353 aa13.1□□□□□ -0.31
CLN5-218ENST00000637397 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
CLN5-218ENST00000637397 AREGP15514 252 aa13.1□□□□□ -0.31
CLN5-218ENST00000637397 IGKV1-39P01597 117 aa13.1□□□□□ -0.31
CLN5-218ENST00000637397 IGKV1D-39P04432 117 aa13.1□□□□□ -0.31
CLN5-218ENST00000637397 KLF2Q9Y5W3 355 aaPredicted RBP13.1□□□□□ -0.31
CLN5-218ENST00000637397 FBLN7Q53RD9 439 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 PRR7Q8TB68 274 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 IGKV1D-33P01593 117 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 IGKV1-33P01594 117 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 BSPH1Q075Z2 132 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 COL6A6A6NMZ7 2263 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 CRIM1Q9NZV1 1036 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 GPR183P32249 361 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 OR10J6PQ8NGY7 276 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 LYPD6BQ8NI32 183 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 TMEM208Q9BTX3 173 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 PHLDA3Q9Y5J5 127 aa13.09□□□□□ -0.31
CLN5-218ENST00000637397 ORMDL3Q8N138 153 aa13.08□□□□□ -0.31
CLN5-218ENST00000637397 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.31
CLN5-218ENST00000637397 TMEM238LA0A1B0GVL6 79 aa13.08□□□□□ -0.32
CLN5-218ENST00000637397 A6NJY4 79 aa13.08□□□□□ -0.32
CLN5-218ENST00000637397 MLNRO43193 412 aa13.08□□□□□ -0.32
CLN5-218ENST00000637397 SMIM13P0DJ93 91 aa13.08□□□□□ -0.32
CLN5-218ENST00000637397 MBNL3Q9NUK0 354 aaKnown RBP13.08□□□□□ -0.32
CLN5-218ENST00000637397 FAM53AQ6NSI3 398 aaPredicted RBP13.08□□□□□ -0.32
CLN5-218ENST00000637397 CIARTQ8N365 385 aaPredicted RBP13.08□□□□□ -0.32
CLN5-218ENST00000637397 ABCA4P78363 2273 aa13.08□□□□□ -0.32
CLN5-218ENST00000637397 PROK2Q9HC23 129 aa13.08□□□□□ -0.32
CLN5-218ENST00000637397 H7C2G1 150 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 GPX1P07203 203 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 OTORQ9NRC9 128 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 ZNF257Q9Y2Q1 563 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 POLR3KQ9Y2Y1 108 aaPredicted RBP13.07□□□□□ -0.32
CLN5-218ENST00000637397 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 MLANAQ16655 118 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 IGHV3-66A0A0C4DH42 116 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 H3BUT2 72 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 PLA2G2EQ9NZK7 142 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 DPM3Q9P2X0 92 aa13.07□□□□□ -0.32
CLN5-218ENST00000637397 IGLV3-1P01715 115 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 LYPD6Q86Y78 171 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 SNHG12Q9BXW3 62 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 LINC01560Q8TB33 94 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 LOC105371242A0A075B767 164 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 LDLRAD2Q5SZI1 272 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 PPP1R27Q86WC6 154 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 ARL6IP6Q8N6S5 226 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 B9A039 149 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 TDGF1P3P51864 188 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 Q6AWC8 147 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 C21orf62Q9NYP8 219 aa13.06□□□□□ -0.32
CLN5-218ENST00000637397 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 IGHV1-46P01743 117 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 LINC00479Q96M42 142 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 PF4V1P10720 104 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 OR11H12B2RN74 326 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 HAPLN4Q86UW8 402 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 FER1L6-AS1Q8NA97 138 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 OR11H1Q8NG94 326 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 OR11H2Q8NH07 326 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 SPCS1Q9Y6A9 102 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 TANC1Q9C0D5 1861 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 APOBEC3AP31941 199 aaPredicted RBP13.05□□□□□ -0.32
CLN5-218ENST00000637397 HIST1H1AQ02539 215 aaPredicted RBP13.05□□□□□ -0.32
CLN5-218ENST00000637397 FOXC2Q99958 501 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 LY96Q9Y6Y9 160 aa13.05□□□□□ -0.32
CLN5-218ENST00000637397 CD24P25063 80 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 KIR3DL3Q8N743 410 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 NPPCP23582 126 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 SMIM12Q96EX1 92 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 IGKV1D-17A0A075B6S4 117 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 A0A1B0GW15 77 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 CDKN1AP38936 164 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 NUP35Q8NFH5 326 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 PSG8Q9UQ74 426 aa13.04□□□□□ -0.32
CLN5-218ENST00000637397 COL4A3Q01955 1670 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms