RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 KCNIP2Q9NS61 270 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 SLC45A2Q9UMX9 530 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 RNF114Q9Y508 228 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.39□□□□□ -0.75
LINC00643-207ENST00000637212 MFSD2BA6NFX1 497 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 ZFP92A6NM28 416 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 GNG7O60262 68 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 IGLC1P0CG04 106 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 SPP1P10451 314 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 OR10J1P30954 320 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 RPL29P47914 159 aaKnown RBP10.39□□□□□ -0.75
LINC00643-207ENST00000637212 CAMLGP49069 296 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 PROK1P58294 105 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 YPEL3P61236 119 aaPredicted RBP10.39□□□□□ -0.75
LINC00643-207ENST00000637212 SERF2P84101 59 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 Q56UQ5 140 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 SPSB3Q6PJ21 355 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 HSD17B11Q8NBQ5 300 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 MGST2Q99735 147 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 NPCDR1Q9BY65 106 aa10.39□□□□□ -0.75
LINC00643-207ENST00000637212 IGKV1D-37A0A075B6S9 117 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 TCRBV4S1A1TA0A5B7 111 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 F8W735 103 aaPredicted RBP10.38□□□□□ -0.75
LINC00643-207ENST00000637212 AGPAT2O15120 278 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 CFDP00746 253 aaPredicted RBP10.38□□□□□ -0.75
LINC00643-207ENST00000637212 CTSGP08311 255 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 ATP6V0CP27449 155 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 CDX1P47902 265 aaPredicted RBP10.38□□□□□ -0.75
LINC00643-207ENST00000637212 FOXL1Q12952 345 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 TEX261Q6UWH6 196 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 C10orf99Q6UWK7 81 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 CYP2G1PQ6ZSU1 146 aa10.38□□□□□ -0.75
LINC00643-207ENST00000637212 NUPL2O15504 423 aaKnown RBP10.37□□□□□ -0.75
LINC00643-207ENST00000637212 IFNA7P01567 189 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 IGKV1-17P01599 117 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 RPLP1P05386 114 aaKnown RBP10.37□□□□□ -0.75
LINC00643-207ENST00000637212 PRR20EP86478 221 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 PRR20CP86479 221 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 PRR20DP86480 221 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 PRR20BP86481 221 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 PRR20AP86496 221 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 CLEC19AQ6UXS0 136 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 OR2G3Q8NGZ4 309 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 SLC25A32Q9H2D1 315 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 JMJD1CQ15652 2540 aa10.37□□□□□ -0.75
LINC00643-207ENST00000637212 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 IGHV3-23P01764 117 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 MBP02144 154 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 LINC00869P0C866 280 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 RD3LP0DJH9 198 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 RAB5CP51148 216 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 SRSF2Q01130 221 aaKnown RBP10.36□□□□□ -0.75
LINC00643-207ENST00000637212 RUNX1Q01196 453 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 TCTEX1D4Q5JR98 221 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 PXDC1Q5TGL8 231 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 ZNF680Q8NEM1 530 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 Q8WTZ3 238 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 CCDC140Q96MF4 163 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 RSG1Q9BU20 258 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 PEF1Q9UBV8 284 aaKnown RBP10.36□□□□□ -0.75
LINC00643-207ENST00000637212 S4R3C0 116 aa10.36□□□□□ -0.75
LINC00643-207ENST00000637212 OR2T8A6NH00 312 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 TGOLN2O43493 480 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 TSPAN15O95858 294 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 TOMM40O96008 361 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
LINC00643-207ENST00000637212 DEFA5Q01523 94 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 ZNF90Q03938 601 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 RELQ04864 619 aaPredicted RBP10.35□□□□□ -0.75
LINC00643-207ENST00000637212 ZNF616Q08AN1 781 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 TIGITQ495A1 244 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 Q6ZRG5 221 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 LCNL1Q6ZST4 164 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 BPIFCQ8NFQ6 507 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 C19orf24Q9BVV8 132 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 SH3BGRL3Q9H299 93 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 SLC39A9Q9NUM3 307 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 PXMP4Q9Y6I8 212 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 DNHD1Q96M86 4753 aa10.35□□□□□ -0.75
LINC00643-207ENST00000637212 GGCTO75223 188 aaKnown RBP10.34□□□□□ -0.75
LINC00643-207ENST00000637212 IGHV3-11P01762 117 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 HSPB1P04792 205 aaKnown RBP10.34□□□□□ -0.75
LINC00643-207ENST00000637212 GPR183P32249 361 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 ADMP35318 185 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 PLP1P60201 277 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 B2MP61769 119 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 IFITM2Q01629 132 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 ACOT6Q3I5F7 207 aaPredicted RBP10.34□□□□□ -0.75
LINC00643-207ENST00000637212 DPPA3Q6W0C5 159 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 ZNF600Q6ZNG1 722 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 ZNF767PQ75MW2 155 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.34□□□□□ -0.75
LINC00643-207ENST00000637212 TMED6Q8WW62 240 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 CHRDL1Q9BU40 450 aa10.34□□□□□ -0.75
LINC00643-207ENST00000637212 TSSC4Q9Y5U2 329 aaPredicted RBP10.34□□□□□ -0.75
LINC00643-207ENST00000637212 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
LINC00643-207ENST00000637212 WI2-2373I1.2A0A1W2PRP0 233 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms