RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 MUC21A0A140T8X8 626 aa12.69□□□□□ -0.38
CACNA1A-235ENST00000637004 CD5LO43866 347 aa12.69□□□□□ -0.38
CACNA1A-235ENST00000637004 ZNF883P0CG24 379 aa12.69□□□□□ -0.38
CACNA1A-235ENST00000637004 HBBP68871 147 aa12.69□□□□□ -0.38
CACNA1A-235ENST00000637004 C2orf83Q53S99 150 aa12.69□□□□□ -0.38
CACNA1A-235ENST00000637004 MUC21Q5SSG8 566 aa12.69□□□□□ -0.38
CACNA1A-235ENST00000637004 PIP4P1Q86T03 277 aa12.69□□□□□ -0.38
CACNA1A-235ENST00000637004 SLC25A2Q9BXI2 301 aa12.69□□□□□ -0.38
CACNA1A-235ENST00000637004 MAP1BP46821 2468 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-235ENST00000637004 hDV102S1A0JD36 115 aa12.68□□□□□ -0.38
CACNA1A-235ENST00000637004 URB1-AS1Q96HZ7 61 aa12.68□□□□□ -0.38
CACNA1A-235ENST00000637004 OR5AL1P0C617 328 aa12.68□□□□□ -0.38
CACNA1A-235ENST00000637004 MZT1Q08AG7 82 aa12.68□□□□□ -0.38
CACNA1A-235ENST00000637004 OR9G1Q8NH87 305 aa12.68□□□□□ -0.38
CACNA1A-235ENST00000637004 RAB9BQ9NP90 201 aa12.68□□□□□ -0.38
CACNA1A-235ENST00000637004 FAM71F2Q6NXP2 309 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 MS4A6AQ9H2W1 248 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 CACNA1GO43497 2377 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 IGHV1-24A0A0C4DH33 117 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 MYOD1P15172 320 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 HIST1H1AQ02539 215 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 ASPHD1Q5U4P2 390 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 SSX8Q7RTT4 187 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 ZNF329Q86UD4 541 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 CALYQ9NYX4 217 aa12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 PEF1Q9UBV8 284 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-235ENST00000637004 GAGE12BA1L429 117 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 LIPFP07098 398 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 NBEAP1P0C6P0 100 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 IGHV1-2P23083 117 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 PET117Q6UWS5 81 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 C1orf229Q6ZS94 237 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 OR1L8Q8NGR8 309 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 SMIM12Q96EX1 92 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 ZNF714Q96N38 554 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 PAXXQ9BUH6 204 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 TP73-AS1Q9UF72 201 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 TRAV5A0A0B4J249 113 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 SH2D7A6NKC9 451 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 DNAJC13O75165 2243 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 PSG9Q00887 426 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 CD69Q07108 199 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 FOXC1Q12948 553 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 HES3Q5TGS1 186 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 S100A7AQ86SG5 101 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 CACNG8Q8WXS5 425 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 MAP1LC3CQ9BXW4 147 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 IGKV1D-17A0A075B6S4 117 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 PSMB11A5LHX3 300 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 UPK2O00526 184 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 LYZL6O75951 148 aa12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 APOBEC3AP31941 199 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 ZNF430Q9H8G1 570 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-235ENST00000637004 COX7A2P2O60397 106 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 CT45A1Q5HYN5 189 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 MORN5Q5VZ52 161 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 OR1L4Q8NGR5 311 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 CT45A3Q8NHU0 189 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 ATMQ13315 3056 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 PRRC2CQ9Y520 2896 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 DOCK10Q96BY6 2186 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 CORTO00230 105 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 MEOX1P50221 254 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 FOXA3P55318 350 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 LINC00696Q6ZRV3 163 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 KLF13Q9Y2Y9 288 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-235ENST00000637004 A8MWL6 223 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 VWC2LB2RUY7 222 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 KLRC4-KLRK1H3BQV0 150 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 ACP1P24666 158 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 FABP6P51161 128 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 SRRM5B3KS81 715 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 PYYP10082 97 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 RNASE2P10153 161 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 C10orf113Q5VZT2 155 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 TMEM108Q6UXF1 575 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 GCSAMQ8N6F7 178 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 LEAP2Q969E1 77 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 RPP21Q9H633 154 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 HSPB8Q9UJY1 196 aa12.64□□□□□ -0.39
CACNA1A-235ENST00000637004 MLANAQ16655 118 aa12.63□□□□□ -0.39
CACNA1A-235ENST00000637004 CT83Q5H943 113 aa12.63□□□□□ -0.39
CACNA1A-235ENST00000637004 LINC00173Q6ZV60 143 aa12.63□□□□□ -0.39
CACNA1A-235ENST00000637004 TEX50A0A1B0GTY4 177 aa12.63□□□□□ -0.39
CACNA1A-235ENST00000637004 GPR183P32249 361 aa12.63□□□□□ -0.39
CACNA1A-235ENST00000637004 FZR1Q9UM11 496 aa12.63□□□□□ -0.39
CACNA1A-235ENST00000637004 URB1O60287 2271 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-235ENST00000637004 EPG5Q9HCE0 2579 aa12.63□□□□□ -0.39
CACNA1A-235ENST00000637004 TCF24Q7RTU0 167 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 H1FXQ92522 213 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 GPR82Q96P67 336 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 PCSK5Q92824 1860 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 A0A1W2PNU3 283 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 IGKV3-15P01624 115 aa12.62□□□□□ -0.39
CACNA1A-235ENST00000637004 PRSS57Q6UWY2 283 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms