RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 FBN3Q75N90 2809 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 TREML4Q6UXN2 200 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 DPF1Q92782 380 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 CXorf58Q96LI9 332 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 PUS1Q9Y606 427 aaKnown RBP eCLIP6.48□□□□□ -1.37
CDKL5-209ENST00000635828 FXYD6-FXYD2A0A087WZ82 144 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 TRBV7-1A0A0A6YYK4 115 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 HIST1H1BP16401 226 aaKnown RBP6.48□□□□□ -1.37
CDKL5-209ENST00000635828 SUB1P53999 127 aaKnown RBP eCLIP6.48□□□□□ -1.37
CDKL5-209ENST00000635828 MFAP4P55083 255 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 RUNX1Q01196 453 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 OR5C1Q8NGR4 320 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 VN1R17PQ8TDU5 208 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 RNF222A6NCQ9 220 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 M0QZ24 198 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 CLN5O75503 358 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 OR10J1P30954 320 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 NKX2-5P52952 324 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-209ENST00000635828 USF2Q15853 346 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-209ENST00000635828 TMEM116Q8NCL8 245 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 OR4F17Q8NGA8 305 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 OR4X1Q8NH49 305 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 RNASEH2CQ8TDP1 164 aaKnown RBP6.48□□□□□ -1.37
CDKL5-209ENST00000635828 OR4F4Q96R69 305 aa6.48□□□□□ -1.37
CDKL5-209ENST00000635828 IGKV3-7A0A075B6H7 116 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 UBE2L5PA0A1B0GUS4 154 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 TMEM213A2RRL7 107 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 TSC22D2O75157 780 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 PSG1P11464 419 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 TOMM20LQ6UXN7 152 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 CIB3Q96Q77 187 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-209ENST00000635828 GIPP09681 153 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-209ENST00000635828 CD33P20138 364 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 KRTAP10-11P60412 298 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 GCSAMLQ5JQS6 135 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 LEMD1Q68G75 181 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 DOK5Q9P104 306 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 ZFP92A6NM28 416 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 ARPC5O15511 151 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 GGCTO75223 188 aaKnown RBP6.47□□□□□ -1.37
CDKL5-209ENST00000635828 RPL12P30050 165 aaKnown RBP6.47□□□□□ -1.37
CDKL5-209ENST00000635828 RAB11AP62491 216 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 AKR1C1Q04828 323 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 OR10P1Q8NGE3 313 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 UHRF2Q96PU4 802 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 MGST2Q99735 147 aa6.47□□□□□ -1.37
CDKL5-209ENST00000635828 E5RGE8 158 aa6.46□□□□□ -1.37
CDKL5-209ENST00000635828 OVOL1O14753 267 aa6.46□□□□□ -1.37
CDKL5-209ENST00000635828 MORN5Q5VZ52 161 aa6.46□□□□□ -1.37
CDKL5-209ENST00000635828 OR9G4Q8NGQ1 327 aa6.46□□□□□ -1.37
CDKL5-209ENST00000635828 MLXQ9UH92 298 aa6.46□□□□□ -1.37
CDKL5-209ENST00000635828 NUPL2O15504 423 aaKnown RBP6.46□□□□□ -1.38
CDKL5-209ENST00000635828 SAP30O75446 220 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 MYCNOSP40205 109 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 SULT1A1P50225 295 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 PRR31Q5SQ13 230 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 NEURL2Q9BR09 285 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 PBDC1Q9BVG4 233 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 CSN3P07498 182 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 LYL1P12980 280 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 TAS2R30P59541 319 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 RSG1Q9BU20 258 aa6.46□□□□□ -1.38
CDKL5-209ENST00000635828 SEC14L6B5MCN3 397 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 IL4P05112 153 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 CXCL2P19875 107 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 P2RY1P47900 373 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 CYCSP99999 105 aaKnown RBP6.45□□□□□ -1.38
CDKL5-209ENST00000635828 BTNL8Q6UX41 500 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 ZNF546Q86UE3 836 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 BPIFCQ8NFQ6 507 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 OR51G1Q8NGK1 321 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 PIGBOS1A0A0B4J2F0 54 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 C2orf70A6NJV1 201 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 CORTO00230 105 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 FOLR2P14207 255 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 OR1L6Q8NGR2 347 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 DNAH9Q9NYC9 4486 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 CSMD3Q7Z407 3707 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 RLN2P04090 185 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 CBLN1P23435 193 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 MIC13Q5XKP0 118 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 WFDC9Q8NEX5 89 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 RNF2Q99496 336 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 FBXL17Q9UF56 701 aa6.45□□□□□ -1.38
CDKL5-209ENST00000635828 LSM4Q9Y4Z0 139 aaKnown RBP6.45□□□□□ -1.38
CDKL5-209ENST00000635828 AGPAT2O15120 278 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 SCAF4O95104 1147 aaKnown RBP6.44□□□□□ -1.38
CDKL5-209ENST00000635828 PVALBP20472 110 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-209ENST00000635828 NPBWR1P48145 328 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 RAP2BP61225 183 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 SLC35E1Q96K37 410 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 WFDC10AQ9H1F0 79 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 SH3BGRL3Q9H299 93 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 TNFSF18Q9UNG2 199 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 AGRNO00468 2067 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 ORM2P19652 201 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 LYZP61626 148 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 GPHB5Q86YW7 130 aa6.44□□□□□ -1.38
CDKL5-209ENST00000635828 TMEM190Q8WZ59 177 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms