RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 C5orf30Q96GV9 206 aa17.37■□□□□ 0.37
SMARCA2-227ENST00000634760 C14orf144Q96I85 54 aa17.37■□□□□ 0.37
SMARCA2-227ENST00000634760 GGTLC1Q9BX51 225 aa17.37■□□□□ 0.37
SMARCA2-227ENST00000634760 ANK1P16157 1881 aa17.37■□□□□ 0.37
SMARCA2-227ENST00000634760 TRAV9-2A0A087WT02 112 aa17.37■□□□□ 0.37
SMARCA2-227ENST00000634760 EMP1P54849 157 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 FOXL1Q12952 345 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 NMSQ5H8A3 153 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 CKAP5Q14008 2032 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 NDUFA3O95167 84 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 CFPP27918 469 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 ZNF672Q499Z4 452 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 SRSF8Q9BRL6 282 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 BEX4Q9NWD9 120 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 TRGV2A0A075B6R0 118 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 MBD3L4A6NDZ8 208 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 MBD3L3A6NE82 208 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 MBD3L5A6NJ08 208 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 IGHV3-11P01762 117 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 QRFPP83859 136 aa17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 MBD3L2Q8NHZ7 208 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-227ENST00000634760 LYL1P12980 280 aa17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 FOXF2Q12947 444 aa17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 TMEM14EPQ6UXP3 125 aa17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 IGHG3P01860 377 aa17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 Q0VFX4 171 aa17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 VMO1Q7Z5L0 202 aa17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 CD177Q8N6Q3 437 aa17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 IGHV1-3A0A0C4DH29 117 aa17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 SUPT4H1P63272 117 aaKnown RBP17.35■□□□□ 0.37
SMARCA2-227ENST00000634760 TSPAN13O95857 204 aa17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 NIT1Q86X76 327 aa17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 TRBV7-1A0A0A6YYK4 115 aa17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 B3GALT5-AS1P59052 145 aa17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 FAM19A2Q8N3H0 131 aa17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 DICER1Q9UPY3 1922 aaKnown RBP17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 ASCL4Q6XD76 172 aa17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 A0A1B0GWJ7 208 aa17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 Q6P435 159 aa17.34■□□□□ 0.37
SMARCA2-227ENST00000634760 MS4A6AQ9H2W1 248 aa17.33■□□□□ 0.37
SMARCA2-227ENST00000634760 SPCS1Q9Y6A9 102 aa17.33■□□□□ 0.37
SMARCA2-227ENST00000634760 PIKFYVEQ9Y2I7 2098 aa17.33■□□□□ 0.36
SMARCA2-227ENST00000634760 CHTOPQ9Y3Y2 248 aaKnown RBP17.33■□□□□ 0.36
SMARCA2-227ENST00000634760 DOCK3Q8IZD9 2030 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 LYPD1Q8N2G4 141 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 VSIRQ9H7M9 311 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 METRNQ9UJH8 293 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 ITGB1BP1O14713 200 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 GAFA1Q96PS6 74 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 LAMTOR2Q9Y2Q5 125 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 NDUFAF3Q9BU61 184 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 SCN8AQ9UQD0 1980 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 TDGF1P13385 188 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 NUDT10Q8NFP7 164 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 COQ2Q96H96 371 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BKO60814 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BJP06899 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BOP23527 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BBP33778 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BDP58876 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BCP62807 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST2H2BEQ16778 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 C3orf36Q3SXR2 165 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 BEND2Q8NDZ0 799 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BHQ93079 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BNQ99877 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 HIST1H2BMQ99879 126 aa17.32■□□□□ 0.36
SMARCA2-227ENST00000634760 H0YJW9 148 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 IGKCP01834 107 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 DTX2Q86UW9 622 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 MGST2Q99735 147 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 MYOFQ9NZM1 2061 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 TFF1P04155 84 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 NUDT11Q96G61 164 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 SBF1O95248 1867 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 MUC21A0A0G2JKD1 596 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 MUC21A0A140T8X8 626 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 MUC21Q5SSG8 566 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 C10orf126Q8N4M7 172 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 SLC25A39Q9BZJ4 359 aaPredicted RBP17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 CLDN16Q9Y5I7 305 aa17.31■□□□□ 0.36
SMARCA2-227ENST00000634760 SPOCK3Q9BQ16 436 aa17.3■□□□□ 0.36
SMARCA2-227ENST00000634760 A0A1B0GWB2 263 aa17.3■□□□□ 0.36
SMARCA2-227ENST00000634760 FAM223BA6NKX1 122 aa17.3■□□□□ 0.36
SMARCA2-227ENST00000634760 FAM223AQ8IWN6 122 aa17.3■□□□□ 0.36
SMARCA2-227ENST00000634760 SSBP4Q9BWG4 385 aaPredicted RBP17.3■□□□□ 0.36
SMARCA2-227ENST00000634760 TDRD6O60522 2096 aaKnown RBP17.3■□□□□ 0.36
SMARCA2-227ENST00000634760 DTX1Q86Y01 620 aa17.3■□□□□ 0.36
SMARCA2-227ENST00000634760 MLNRO43193 412 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 RNF182Q8N6D2 247 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 BMPERQ8N8U9 685 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 ST6GALNAC3Q8NDV1 305 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 OR10W1Q8NGF6 305 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 IGKV1-5P01602 117 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 OR5A1Q8NGJ0 315 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 DPH3Q96FX2 82 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 C9orf139Q6ZV77 190 aa17.29■□□□□ 0.36
SMARCA2-227ENST00000634760 C21orf62-AS1Q17RA5 79 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms