RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 RNF17Q9BXT8 1623 aaKnown RBP2.13□□□□□ -2.07
CNOT1-223ENST00000628857 CC2D2AQ9P2K1 1620 aa2.13□□□□□ -2.07
CNOT1-223ENST00000628857 MIA3Q5JRA6 1907 aa2.13□□□□□ -2.07
CNOT1-223ENST00000628857 KIAA1671Q9BY89 1806 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 CUX1P39880 1505 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 PHF3Q92576 2039 aaKnown RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 CCDC88CQ9P219 2028 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 SPHKAPQ2M3C7 1700 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 IGKV1D-8A0A087WSZ0 117 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 TRAV27A0A087WT01 109 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 LOC100131303A0A0U1RQF7 123 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 ARRDC5A6NEK1 342 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 TMEM235A6NFC5 223 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 EPOPA6NHQ4 379 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 E9PLD3 99 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 TMEM262E9PQX1 116 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 M0R1X1 148 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 CD5LO43866 347 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BKO60814 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 SIX6O95475 246 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 CFDP00746 253 aaPredicted RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HRASP01112 189 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 TRGC2P03986 189 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BJP06899 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 CRYGSP22914 178 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BOP23527 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 PSMB8P28062 276 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BBP33778 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 GFERP55789 205 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BDP58876 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 C1QTNF8P60827 252 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BCP62807 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 ATP5G2Q06055 141 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 CST6Q15828 149 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 ADIRFQ15847 76 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST2H2BEQ16778 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 LGALSLQ3ZCW2 172 aaPredicted RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 COA6Q5JTJ3 125 aaKnown RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 C9orf129Q5T035 196 aaKnown RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF57Q68EA5 555 aaPredicted RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 AMTNQ6UX39 209 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 CLEC19AQ6UXS0 136 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HEPN1Q6WQI6 88 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 SLC25A26Q70HW3 274 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 TRAPPC6BQ86SZ2 158 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 RPS19BP1Q86WX3 136 aaKnown RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 NPWQ8N729 165 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 OR2T10Q8NGZ9 312 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 OR10AC1Q8NH08 325 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 RPS4Y2Q8TD47 263 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 LMX1AQ8TE12 382 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 BRK1Q8WUW1 75 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BHQ93079 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 POP5Q969H6 163 aaKnown RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 FAM19A4Q96LR4 140 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 GPX7Q96SL4 187 aaPredicted RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BNQ99877 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 HIST1H2BMQ99879 126 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 TBL1YQ9BQ87 522 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 PRSS27Q9BQR3 290 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 AICDAQ9GZX7 198 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 NAA60Q9H7X0 242 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 CALYQ9NYX4 217 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 AK3Q9UIJ7 227 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF222Q9UK12 451 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 KCNE3Q9Y6H6 103 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 DYSFO75923 2080 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 RGPD3A6NKT7 1758 aaPredicted RBP2.12□□□□□ -2.07
CNOT1-223ENST00000628857 STRCQ7RTU9 1775 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 NCOA2Q15596 1464 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 DSPPQ9NZW4 1301 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 SCN2AQ99250 2005 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 ZMYM4Q5VZL5 1548 aa2.12□□□□□ -2.07
CNOT1-223ENST00000628857 PLIN4Q96Q06 1357 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 MON2Q7Z3U7 1717 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 IFT172Q9UG01 1749 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 RIMBP3CA6NJZ7 1639 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 RIMBP3BA6NNM3 1639 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 RIMBP3Q9UFD9 1639 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 TRAV8-3A0A0A6YYJ7 113 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 IGLV1-36A0A0B4J1U3 117 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 IGHV2-26A0A0B4J1V2 119 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 A0A0J9YW62 118 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 C3orf85A0A1B0GTC6 90 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 IZUMO1RA6ND01 250 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 TLCD2A6NGC4 264 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 A8MWV9 139 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 F8W1H4 67 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 TAX1BP3O14907 124 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 UQCRQO14949 82 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 SNCGO76070 127 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 UBL3O95164 117 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 SFT2D2O95562 160 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 NAPSAO96009 420 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 CD55P08174 381 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 CECR9P0C854 216 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 PYYP10082 97 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 FABP2P12104 132 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 ADCYAP1P18509 176 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms