RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 FAM74A1Q5RGS3 127 aa18.66■□□□□ 0.58
CAPNS1-216ENST00000628306 SLC25A24Q6NUK1 477 aa18.66■□□□□ 0.58
CAPNS1-216ENST00000628306 OR10W1Q8NGF6 305 aa18.66■□□□□ 0.58
CAPNS1-216ENST00000628306 WDR83OSQ9Y284 106 aa18.66■□□□□ 0.58
CAPNS1-216ENST00000628306 FCN1O00602 326 aa18.65■□□□□ 0.58
CAPNS1-216ENST00000628306 SSBP2P81877 361 aaPredicted RBP18.65■□□□□ 0.58
CAPNS1-216ENST00000628306 DPPA3Q6W0C5 159 aa18.65■□□□□ 0.58
CAPNS1-216ENST00000628306 NPVFQ9HCQ7 196 aa18.65■□□□□ 0.58
CAPNS1-216ENST00000628306 PLA2G2EQ9NZK7 142 aa18.65■□□□□ 0.58
CAPNS1-216ENST00000628306 TEX22C9J3V5 150 aa18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 OR13C7P0DN81 318 aa18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 CFHR3Q02985 330 aa18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 CASC10Q5T4H9 136 aa18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 C9orf66Q5T8R8 295 aa18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 TEX38Q6PEX7 206 aa18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 Q8N9W7 124 aa18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 OR2G3Q8NGZ4 309 aa18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 SRSF12Q8WXF0 261 aaKnown RBP18.64■□□□□ 0.57
CAPNS1-216ENST00000628306 CDX1P47902 265 aaPredicted RBP18.63■□□□□ 0.57
CAPNS1-216ENST00000628306 FHL3Q13643 280 aa18.63■□□□□ 0.57
CAPNS1-216ENST00000628306 C10orf55Q5SWW7 151 aa18.63■□□□□ 0.57
CAPNS1-216ENST00000628306 SLC7A5P1Q8MH63 180 aa18.63■□□□□ 0.57
CAPNS1-216ENST00000628306 OR1L6Q8NGR2 347 aa18.63■□□□□ 0.57
CAPNS1-216ENST00000628306 PARP11Q9NR21 331 aa18.63■□□□□ 0.57
CAPNS1-216ENST00000628306 HLA-DRB1P01911 266 aa18.62■□□□□ 0.57
CAPNS1-216ENST00000628306 OR1P1Q8NH06 330 aa18.62■□□□□ 0.57
CAPNS1-216ENST00000628306 SH3BGRL3Q9H299 93 aa18.62■□□□□ 0.57
CAPNS1-216ENST00000628306 NCBP2LA6PVI3 153 aaKnown RBP18.61■□□□□ 0.57
CAPNS1-216ENST00000628306 AP4M1O00189 453 aa18.61■□□□□ 0.57
CAPNS1-216ENST00000628306 CORTO00230 105 aa18.61■□□□□ 0.57
CAPNS1-216ENST00000628306 FOXE3Q13461 319 aa18.61■□□□□ 0.57
CAPNS1-216ENST00000628306 FXYD3Q14802 87 aa18.61■□□□□ 0.57
CAPNS1-216ENST00000628306 LYPD6BQ8NI32 183 aa18.61■□□□□ 0.57
CAPNS1-216ENST00000628306 HYDINQ4G0P3 5121 aa18.6■□□□□ 0.57
CAPNS1-216ENST00000628306 ZNF705EA8MWA4 302 aaPredicted RBP18.6■□□□□ 0.57
CAPNS1-216ENST00000628306 SEC14L6B5MCN3 397 aa18.6■□□□□ 0.57
CAPNS1-216ENST00000628306 C17orf112F2Z3M2 114 aa18.6■□□□□ 0.57
CAPNS1-216ENST00000628306 CNIH1O95406 144 aa18.6■□□□□ 0.57
CAPNS1-216ENST00000628306 CX3CL1P78423 397 aa18.6■□□□□ 0.57
CAPNS1-216ENST00000628306 EIF4E3Q8N5X7 224 aaKnown RBP18.6■□□□□ 0.57
CAPNS1-216ENST00000628306 MUC7Q8TAX7 377 aa18.6■□□□□ 0.57
CAPNS1-216ENST00000628306 SORL1Q92673 2214 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 UBE2L5PA0A1B0GUS4 154 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 ATP6V1G1O75348 118 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 ASPHD1Q5U4P2 390 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 ETFRF1Q6IPR1 90 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 BTNL8Q6UX41 500 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 TMEM144Q7Z5S9 345 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 MYOZ3Q8TDC0 251 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 RASL11BQ9BPW5 248 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 GAR1Q9NY12 217 aaKnown RBP18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 PFDN2Q9UHV9 154 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 FBXO7Q9Y3I1 522 aa18.59■□□□□ 0.57
CAPNS1-216ENST00000628306 MBP02144 154 aa18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 CRYGCP07315 174 aa18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 ELANEP08246 267 aa18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 GNB1P62873 340 aa18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 RUNX1Q01196 453 aa18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 ZNF709Q8N972 641 aa18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 TMEM68Q96MH6 324 aa18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 HSPB9Q9BQS6 159 aa18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 ZNF256Q9Y2P7 627 aaPredicted RBP18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 F11RQ9Y624 299 aaKnown RBP18.58■□□□□ 0.57
CAPNS1-216ENST00000628306 IGHG4P01861 327 aa18.57■□□□□ 0.56
CAPNS1-216ENST00000628306 FGF7P21781 194 aa18.57■□□□□ 0.56
CAPNS1-216ENST00000628306 RAB31Q13636 194 aa18.57■□□□□ 0.56
CAPNS1-216ENST00000628306 KIAA0141Q14154 515 aaPredicted RBP18.57■□□□□ 0.56
CAPNS1-216ENST00000628306 AKR1C8PQ5T2L2 129 aa18.57■□□□□ 0.56
CAPNS1-216ENST00000628306 NPCDR1Q9BY65 106 aa18.57■□□□□ 0.56
CAPNS1-216ENST00000628306 KCNIP2Q9NS61 270 aa18.57■□□□□ 0.56
CAPNS1-216ENST00000628306 CTRB1P17538 263 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 S100A1P23297 94 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 PSMB8P28062 276 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 KLK9Q2XQG4 91 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 CTRB2Q6GPI1 263 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 TEPPQ6URK8 271 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 SBSPONQ8IVN8 264 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 C4orf3Q8WVX3 66 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 PCNPQ8WW12 178 aaKnown RBP18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 RSG1Q9BU20 258 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 KLK9Q9UKQ9 250 aa18.56■□□□□ 0.56
CAPNS1-216ENST00000628306 NPIPB5A8MRT5 1133 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 AREGP15514 252 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 OPRK1P41145 380 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 PXDC1Q5TGL8 231 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 TMEM182Q6ZP80 229 aaPredicted RBP18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 TTC9CQ8N5M4 171 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 ARPC1AQ92747 370 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 CXorf58Q96LI9 332 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 IGHV7-81A0A0B4J1V7 117 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 RAB19A4D1S5 217 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 PRH1P02810 166 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 IL34Q6ZMJ4 242 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 MARC2Q969Z3 335 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 RCHY1Q96PM5 261 aa18.55■□□□□ 0.56
CAPNS1-216ENST00000628306 TRAV1-1A0A0B4J248 108 aa18.54■□□□□ 0.56
CAPNS1-216ENST00000628306 CAMLGP49069 296 aa18.54■□□□□ 0.56
CAPNS1-216ENST00000628306 GAMTQ14353 236 aa18.54■□□□□ 0.56
CAPNS1-216ENST00000628306 Q6ZRG5 221 aa18.54■□□□□ 0.56
CAPNS1-216ENST00000628306 COMMD7Q86VX2 200 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms