RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 PQLC2LA1A4F0 135 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 DPRXA6NFQ7 191 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 TMEM212A6NML5 194 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 TCL1BO95988 128 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 PRB4P10163 310 aaPredicted RBP1.09□□□□□ -2.23
CDKL5-207ENST00000624700 RNASE3P12724 160 aaKnown RBP1.09□□□□□ -2.23
CDKL5-207ENST00000624700 ZNF846Q147U1 533 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 SPOPLQ6IQ16 392 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 LCN15Q6UWW0 184 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 DPPA3Q6W0C5 159 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 OR2T4Q8NH00 348 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 AQP3Q92482 292 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 TOMM6Q96B49 74 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 DCUN1D1Q96GG9 259 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 SBF1O95248 1867 aa1.09□□□□□ -2.24
CDKL5-207ENST00000624700 ASPMQ8IZT6 3477 aa1.09□□□□□ -2.24
CDKL5-207ENST00000624700 SYNJ1O43426 1573 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 EML6Q6ZMW3 1958 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 BRCA2P51587 3418 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 HTTP42858 3142 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 TLN2Q9Y4G6 2542 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 C5orf42Q9H799 3197 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 A0A087WX48 190 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 OR2B3O76000 313 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 OMPP47874 163 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 CEBPGP53567 150 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 UBE2IP63279 158 aaKnown RBP1.08□□□□□ -2.24
CDKL5-207ENST00000624700 C8orf74Q6P047 294 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 OR4E2Q8NGC2 313 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 ODF3Q96PU9 254 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 NIPSNAP1Q9BPW8 284 aa1.08□□□□□ -2.24
CDKL5-207ENST00000624700 CICQ96RK0 1608 aaPredicted RBP1.07□□□□□ -2.24
CDKL5-207ENST00000624700 ZFHX3Q15911 3703 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 KDM5AP29375 1690 aaKnown RBP1.07□□□□□ -2.24
CDKL5-207ENST00000624700 NEO1Q92859 1461 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 CENPFP49454 3210 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 MTORP42345 2549 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 TRAV9-1A0A075B6T8 112 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 C19orf84I3L1E1 186 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 NIPSNAP2O75323 286 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 SERPINA6P08185 405 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 BRS3P32247 399 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 ACOT6Q3I5F7 207 aaPredicted RBP1.07□□□□□ -2.24
CDKL5-207ENST00000624700 KHDC3LQ587J8 217 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 DEFB132Q7Z7B7 95 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 TSPAN32Q96QS1 320 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 C20orf27Q9GZN8 174 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 PARVGQ9HBI0 331 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 SLC39A9Q9NUM3 307 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 VPS29Q9UBQ0 182 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 MUC3AQ02505 3323 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 PLXND1Q9Y4D7 1925 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 NF1P21359 2839 aa1.07□□□□□ -2.24
CDKL5-207ENST00000624700 SSPOA2VEC9 5147 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 CELSR1Q9NYQ6 3014 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 EXOC1LA0A1B0GW35 172 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 CHP2O43745 196 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 ASAH2BP0C7U1 165 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 BAALC-AS2P0C853 105 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 RPL5P46777 297 aaKnown RBP1.06□□□□□ -2.24
CDKL5-207ENST00000624700 HIST3H2BBQ8N257 126 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 ANKRD29Q8N6D5 301 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 C15orf53Q8NAA6 179 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 TERB2Q8NHR7 220 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 CMSS1Q9BQ75 279 aaKnown RBP1.06□□□□□ -2.24
CDKL5-207ENST00000624700 SLC50A1Q9BRV3 221 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 NHP2Q9NX24 153 aaKnown RBP1.06□□□□□ -2.24
CDKL5-207ENST00000624700 CMTM6Q9NX76 183 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 ERGIC3Q9Y282 383 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 FAT4Q6V0I7 4981 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 MTUS2Q5JR59 1369 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 USP34Q70CQ2 3546 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 WRNQ14191 1432 aaPredicted RBP eCLIP1.06□□□□□ -2.24
CDKL5-207ENST00000624700 WDR87Q6ZQQ6 2873 aa1.06□□□□□ -2.24
CDKL5-207ENST00000624700 PIRO00625 290 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 CRYZL1O95825 349 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 MIFP14174 115 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 KISS1Q15726 138 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 TRAPPC6BQ86SZ2 158 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 SIGLECL1Q8N7X8 197 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 DNAJC9Q8WXX5 260 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 H1FXQ92522 213 aaKnown RBP1.05□□□□□ -2.24
CDKL5-207ENST00000624700 KLK6Q92876 244 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 ULBP3Q9BZM4 244 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 TAS2R4Q9NYW5 299 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
CDKL5-207ENST00000624700 IGF2RP11717 2491 aa1.05□□□□□ -2.24
CDKL5-207ENST00000624700 CC2D2AQ9P2K1 1620 aa1.04□□□□□ -2.24
CDKL5-207ENST00000624700 CRYBG3Q68DQ2 2970 aa1.04□□□□□ -2.24
CDKL5-207ENST00000624700 TAF1LQ8IZX4 1826 aa1.04□□□□□ -2.24
CDKL5-207ENST00000624700 ZNF106Q9H2Y7 1883 aaKnown RBP1.04□□□□□ -2.24
CDKL5-207ENST00000624700 CLDN24A6NM45 220 aa1.04□□□□□ -2.24
CDKL5-207ENST00000624700 FADS1O60427 444 aa1.04□□□□□ -2.24
CDKL5-207ENST00000624700 HYPMO75409 117 aa1.04□□□□□ -2.24
CDKL5-207ENST00000624700 CTSDP07339 412 aaPredicted RBP1.04□□□□□ -2.24
CDKL5-207ENST00000624700 RBP1P09455 135 aa1.04□□□□□ -2.24
CDKL5-207ENST00000624700 S100A4P26447 101 aaKnown RBP1.04□□□□□ -2.24
CDKL5-207ENST00000624700 FKBP2P26885 142 aaKnown RBP1.04□□□□□ -2.24
CDKL5-207ENST00000624700 RHEBQ15382 184 aa1.04□□□□□ -2.24
CDKL5-207ENST00000624700 Q6ZQT0 140 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms