RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 TMEM230Q96A57 120 aa7.86□□□□□ -1.15
LINC00963-214ENST00000622680 NDUFAF3Q9BU61 184 aa7.86□□□□□ -1.15
LINC00963-214ENST00000622680 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
LINC00963-214ENST00000622680 EXTL2Q9UBQ6 330 aa7.86□□□□□ -1.15
LINC00963-214ENST00000622680 RSL24D1Q9UHA3 163 aaKnown RBP7.86□□□□□ -1.15
LINC00963-214ENST00000622680 IGLV2-18A0A075B6J9 118 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 CORTO00230 105 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 APOA1P02647 267 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 RCVRNP35243 200 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 UCP3P55916 312 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 PIGPP57054 158 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 DEFB1P60022 68 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 OR4X1Q8NH49 305 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 MCFD2Q8NI22 146 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 NARS2Q96I59 477 aaKnown RBP7.85□□□□□ -1.15
LINC00963-214ENST00000622680 RAB40CQ96S21 281 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 BCL7BQ9BQE9 202 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 PDCD10Q9BUL8 212 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 LRP1BQ9NZR2 4599 aa7.85□□□□□ -1.15
LINC00963-214ENST00000622680 FAM90A26D6RGX4 464 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 INS-IGF2F8WCM5 200 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 CTDSP2O14595 271 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 RND2P52198 227 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 SUB1P53999 127 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC00963-214ENST00000622680 EMP1P54849 157 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 RND3P61587 244 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 SP6Q3SY56 376 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 C16orf54Q6UWD8 224 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 UBE2DNLQ8IWF7 75 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 DIRAS2Q96HU8 199 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 ENY2Q9NPA8 101 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 CCDC59Q9P031 241 aaKnown RBP7.84□□□□□ -1.15
LINC00963-214ENST00000622680 U3KQE9 123 aa7.84□□□□□ -1.15
LINC00963-214ENST00000622680 APOBP04114 4563 aaKnown RBP7.83□□□□□ -1.16
LINC00963-214ENST00000622680 HNRNPCP07910 306 aaKnown RBP eCLIP7.83□□□□□ -1.16
LINC00963-214ENST00000622680 IGLC1P0CG04 106 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 FXYD7P58549 80 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 IL18Q14116 193 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 USF2Q15853 346 aaPredicted RBP7.83□□□□□ -1.16
LINC00963-214ENST00000622680 TRIM16LQ309B1 348 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 BSXQ3C1V8 233 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 GDF5OSQ5U4N7 250 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 GSG1LQ6UXU4 331 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 RNASE11Q8TAA1 199 aaKnown RBP7.83□□□□□ -1.16
LINC00963-214ENST00000622680 DYNC2LI1Q8TCX1 351 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 SCPEP1Q9HB40 452 aa7.83□□□□□ -1.16
LINC00963-214ENST00000622680 IGHV3OR16-12A0A075B7B8 117 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 C3orf85A0A1B0GTC6 90 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 A6NHS1 94 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 H3BMM0 161 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 SCGB2A1O75556 95 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 NXPH3O95157 252 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 IGKV3-20P01619 116 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 IL4P05112 153 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 OR10J1P30954 320 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 S100A5P33763 92 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 EIF2B2P49770 351 aaKnown RBP7.82□□□□□ -1.16
LINC00963-214ENST00000622680 DHODHQ02127 395 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 LGALS9BQ3B8N2 356 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 PRSS54Q6PEW0 395 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 Q6ZR54 194 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 Q6ZRM9 215 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 LHFPL1Q86WI0 220 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 OR4D10Q8NGI6 311 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 OR1S2Q8NGQ3 325 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 C1QTNF4Q9BXJ3 329 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 NRN1Q9NPD7 142 aa7.82□□□□□ -1.16
LINC00963-214ENST00000622680 TRAV30A0A087WSZ9 112 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 IFNA10P01566 189 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 CD74P04233 296 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 CD3DP04234 171 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 HLA-DRB4P13762 266 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 HTN3P15516 51 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 NPY1RP25929 384 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 NUTF2P61970 127 aaKnown RBP7.81□□□□□ -1.16
LINC00963-214ENST00000622680 SNRPD3P62318 126 aaKnown RBP7.81□□□□□ -1.16
LINC00963-214ENST00000622680 RNASE10Q5GAN6 216 aaKnown RBP7.81□□□□□ -1.16
LINC00963-214ENST00000622680 SIGLEC15Q6ZMC9 328 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 ZNF705AQ6ZN79 300 aaPredicted RBP7.81□□□□□ -1.16
LINC00963-214ENST00000622680 OR13C8Q8NGS7 320 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 LHFPL5Q8TAF8 219 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 TMEM170AQ8WVE7 144 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 RRNAD1Q96FB5 475 aaKnown RBP7.81□□□□□ -1.16
LINC00963-214ENST00000622680 ZNF486Q96H40 463 aaPredicted RBP7.81□□□□□ -1.16
LINC00963-214ENST00000622680 RBM38Q9H0Z9 239 aaKnown RBP7.81□□□□□ -1.16
LINC00963-214ENST00000622680 MIXL1Q9H2W2 232 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 HEYLQ9NQ87 328 aaPredicted RBP7.81□□□□□ -1.16
LINC00963-214ENST00000622680 PLA2G2EQ9NZK7 142 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 NDUFA13Q9P0J0 144 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 COPZ2Q9P299 210 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 KLK11Q9UBX7 282 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 HLA-DRB4X5D2U9 266 aa7.81□□□□□ -1.16
LINC00963-214ENST00000622680 RPS10-NUDT3A0A1W2PQS6 291 aa7.8□□□□□ -1.16
LINC00963-214ENST00000622680 FABP12A6NFH5 140 aa7.8□□□□□ -1.16
LINC00963-214ENST00000622680 ZNF705FA8MVS1 300 aaPredicted RBP7.8□□□□□ -1.16
LINC00963-214ENST00000622680 IFNA21P01568 189 aa7.8□□□□□ -1.16
LINC00963-214ENST00000622680 ZNF705DP0CH99 300 aaPredicted RBP7.8□□□□□ -1.16
LINC00963-214ENST00000622680 ZNF705BP0CI00 300 aaPredicted RBP7.8□□□□□ -1.16
LINC00963-214ENST00000622680 UCP1P25874 307 aa7.8□□□□□ -1.16
LINC00963-214ENST00000622680 YPEL3P61236 119 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms