RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CDC42BPAQ5VT25 1732 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 ABCA3Q99758 1704 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 MYO5CQ9NQX4 1742 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 CASKIN1Q8WXD9 1431 aa2.08□□□□□ -2.08
CPNE3-213ENST00000622183 GRIN2AQ12879 1464 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 CLASP1Q7Z460 1538 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 ABCC2Q92887 1545 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 MYH6P13533 1939 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 ADGBQ8N7X0 1667 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 A0A087WX48 190 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 TRGV5A0A0B4J1U4 118 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 A0A0J9YY10 115 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 A0A1B0GX51 115 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 A0A1B0GX78 115 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 TRAPPC13A5PLN9 417 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 FAM159BA6NKW6 160 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 PDE6DO43924 150 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 GADD45GO95257 159 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 S100GP29377 79 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 AKR1D1P51857 326 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 TCTAP57738 103 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 RRAS2P62070 204 aaPredicted RBP2.07□□□□□ -2.08
CPNE3-213ENST00000622183 PPP3R1P63098 170 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 HIST1H3AP68431 136 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 MRPS10P82664 201 aaKnown RBP2.07□□□□□ -2.08
CPNE3-213ENST00000622183 H3F3AP84243 136 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 RUNX1Q01196 453 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 SURF2Q15527 256 aaPredicted RBP2.07□□□□□ -2.08
CPNE3-213ENST00000622183 MIAQ16674 131 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 ARHGAP11BQ3KRB8 267 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 SAMD13Q5VXD3 122 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 Q6ZS52 159 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 DEFB128Q7Z7B8 93 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 LHFPL1Q86WI0 220 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 LCN9Q8WX39 176 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 DNAJC9Q8WXX5 260 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 TXNDC17Q9BRA2 123 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 TMEM106BQ9NUM4 274 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 OPTCQ9UBM4 332 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 UTP11Q9Y3A2 253 aaKnown RBP2.07□□□□□ -2.08
CPNE3-213ENST00000622183 ZNF106Q9H2Y7 1883 aaKnown RBP2.07□□□□□ -2.08
CPNE3-213ENST00000622183 DISP2A7MBM2 1401 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 RTEL1-TNFRSF6BF6WH68 1400 aa2.07□□□□□ -2.08
CPNE3-213ENST00000622183 GLI3P10071 1580 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 FRMPD1Q5SYB0 1578 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 CROCC2H7BZ55 1655 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 MAP2P11137 1827 aaKnown RBP2.06□□□□□ -2.08
CPNE3-213ENST00000622183 BORCS7-ASMTA0A0B4J1R7 106 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 LST1O00453 97 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 SERPINA7P05543 415 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 PAEPP09466 180 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 MPC1LP0DKB6 136 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 HINT1P49773 126 aaPredicted RBP2.06□□□□□ -2.08
CPNE3-213ENST00000622183 CKS1BP61024 79 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 NCALDP61601 193 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 RHOBP62745 196 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 RPS28P62857 69 aaKnown RBP2.06□□□□□ -2.08
CPNE3-213ENST00000622183 RHOGP84095 191 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 ZNF90Q03938 601 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 MORN2Q502X0 79 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 OCIAD2Q56VL3 154 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 TMEM128Q5BJH2 165 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 CLLU1Q5K131 121 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 C6orf52Q5T4I8 152 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 TEX36Q5VZQ5 186 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 TEX261Q6UWH6 196 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 PDZD9Q8IXQ8 264 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 C8orf59Q8N0T1 100 aaPredicted RBP2.06□□□□□ -2.08
CPNE3-213ENST00000622183 C4orf33Q8N1A6 199 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 SMIM20Q8N5G0 67 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 C12orf45Q8N5I9 185 aaPredicted RBP2.06□□□□□ -2.08
CPNE3-213ENST00000622183 OR4D11Q8NGI4 311 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 OR5J2Q8NH18 312 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 VPS25Q9BRG1 176 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 CACYBPQ9HB71 228 aaKnown RBP2.06□□□□□ -2.08
CPNE3-213ENST00000622183 PRO2289Q9P1D8 64 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 COPZ2Q9P299 210 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 SSR3Q9UNL2 185 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 MYH9P35579 1960 aaKnown RBP2.06□□□□□ -2.08
CPNE3-213ENST00000622183 MAGI2Q86UL8 1455 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 NEO1Q92859 1461 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 CUL7Q14999 1698 aa2.06□□□□□ -2.08
CPNE3-213ENST00000622183 MYH1P12882 1939 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 A0A1B0GV50 99 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 EXOC1LA0A1B0GW35 172 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 A0A1W2PRE2 83 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 A8MUN3 132 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 H3BRN7 92 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 M0R143 59 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 PLA2G10O15496 165 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 OR7C1O76099 320 aaPredicted RBP2.05□□□□□ -2.08
CPNE3-213ENST00000622183 ATG12O94817 140 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 OR5G3P0C626 314 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 SMIM17P0DL12 118 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 SULT1A3P0DMM9 295 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 SULT1A4P0DMN0 295 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 SRIP30626 198 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 ETV6P41212 452 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 PIGPP57054 158 aa2.05□□□□□ -2.08
CPNE3-213ENST00000622183 MAXP61244 160 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms