RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	COMMD5	Q9GZQ3	224 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	TMEM14B	Q9NUH8	114 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	FOXA2	Q9Y261	457 aa	Predicted RBP	11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	C8orf88	P0DMB2	117 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	HILPDA	Q9Y5L2	63 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	TPR	P12270	2363 aa	Known RBP	11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	INTS1	Q8N201	2190 aa	Known RBP	11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045		A0A1W2PRE2	83 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	WISP2	O76076	250 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	KLF5	Q13887	457 aa	Predicted RBP	11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	RND1	Q92730	232 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	RAB9B	Q9NP90	201 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	GPR183	P32249	361 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	KIR2DL2	P43627	348 aa	Predicted RBP	11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	OR1B1	Q8NGR6	318 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	AP1S3	Q96PC3	154 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045		H3BTX0	84 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	F2RL2	O00254	374 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	C1orf185	Q5T7R7	199 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	C9orf106	Q8NAJ2	232 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	BLNK	Q8WV28	456 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	RAB37	Q96AX2	223 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	MBD6	Q96DN6	1003 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	SMIM12	Q96EX1	92 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	PEF1	Q9UBV8	284 aa	Known RBP	11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	PLCE1	Q9P212	2302 aa		11.69	□□□□□ -0.54
SYNRG-231	ENST00000622045	CD5L	O43866	347 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	RTL8B	Q17RB0	113 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	TMEM116	Q8NCL8	245 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	ARF6	P62330	175 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	FAM71F2	Q6NXP2	309 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	TEX45	Q8NA69	505 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	FER1L6-AS1	Q8NA97	138 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	ADTRP	Q96IZ2	230 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	SLC25A33	Q9BSK2	321 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	IGHV1-18	A0A0C4DH31	117 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045		M0R1B8	84 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	DDB2	Q92466	427 aa		11.68	□□□□□ -0.54
SYNRG-231	ENST00000622045	IGLC1	P0CG04	106 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	SPRN	Q5BIV9	151 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	OR10W1	Q8NGF6	305 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	WIPF2	Q8TF74	440 aa	Predicted RBP	11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	ITLN1	Q8WWA0	313 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	SCRT2	Q9NQ03	307 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	PEX7	O00628	323 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	IGKV1-16	P04430	117 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	SSBP2	P81877	361 aa	Predicted RBP	11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	MAP1LC3C	Q9BXW4	147 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	PCNX2	A6NKB5	2137 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045		H3BUT2	72 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	HTR1D	P28221	377 aa		11.67	□□□□□ -0.54
SYNRG-231	ENST00000622045	COX7A2P2	O60397	106 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	ZNRD1	Q9P1U0	126 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	PROCR	Q9UNN8	238 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	MUC3A	Q02505	3323 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	MBNL2	Q5VZF2	373 aa	Known RBP	11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	S100A7A	Q86SG5	101 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	BPIFA4P	Q86YQ2	179 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	SLC25A2	Q9BXI2	301 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	KLK10	O43240	276 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	OR2J3	O76001	311 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	HBB	P68871	147 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	PRCD	Q00LT1	54 aa		11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	HIST1H1A	Q02539	215 aa	Predicted RBP	11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.66	□□□□□ -0.54
SYNRG-231	ENST00000622045	UPK2	O00526	184 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	ERH	P84090	104 aa	Known RBP	11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	C17orf58	Q2M2W7	97 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	CCL13	Q99616	98 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	PAXX	Q9BUH6	204 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	TEX50	A0A1B0GTY4	177 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	HIST1H1E	P10412	219 aa	Known RBP	11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	RPS20	P60866	119 aa	Known RBP	11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	TMUB1	Q9BVT8	246 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	CNOT1	A5YKK6	2376 aa	Known RBP	11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	SRRM4	A7MD48	611 aa	Known RBP	11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	SLC25A5	P05141	298 aa	Known RBP	11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	FAM167A-AS1	Q96KT0	104 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	JMJD8	Q96S16	334 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	C19orf24	Q9BVV8	132 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	ZNF835	Q9Y2P0	537 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	ZNF318	Q5VUA4	2279 aa		11.65	□□□□□ -0.54
SYNRG-231	ENST00000622045	DYSF	O75923	2080 aa		11.65	□□□□□ -0.55
SYNRG-231	ENST00000622045	CHEK1	O14757	476 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	ZNF329	Q86UD4	541 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	OR1N2	Q8NGR9	330 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	CACNA1G	O43497	2377 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	RASL11A	Q6T310	242 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	GNG7	O60262	68 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	HLA-DRB1	P01911	266 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	REG1B	P48304	166 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	MSMP	Q1L6U9	139 aa		11.64	□□□□□ -0.55
SYNRG-231	ENST00000622045	TMEM97	Q5BJF2	176 aa		11.64	□□□□□ -0.55

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