RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ASCL2Q99929 193 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 GGACTQ9BVM4 153 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 SLC25A32Q9H2D1 315 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 RPS10-NUDT3A0A1W2PQS6 291 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 PRSS46E5RG02 174 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 I3L521 148 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 OR13C7P0DN81 318 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 ATP6V0CP27449 155 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 CX3CL1P78423 397 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 VWC2Q2TAL6 325 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 LRRC20Q8TCA0 184 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 MYOZ3Q8TDC0 251 aa12.43□□□□□ -0.42
CD40-207ENST00000620709 FAM103A1Q9BTL3 118 aaKnown RBP12.43□□□□□ -0.42
CD40-207ENST00000620709 TEX22C9J3V5 150 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 FXYD3Q14802 87 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 ASPHD1Q5U4P2 390 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 UNQ5815/PRO19632Q6UWF5 114 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 ZNF562Q6V9R5 426 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 ZNF114Q8NC26 417 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 RNF141Q8WVD5 230 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 MS4A10Q96PG2 267 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 WDR61Q9GZS3 305 aaKnown RBP12.42□□□□□ -0.42
CD40-207ENST00000620709 ZNF256Q9Y2P7 627 aaPredicted RBP12.42□□□□□ -0.42
CD40-207ENST00000620709 KMT2CQ8NEZ4 4911 aaKnown RBP12.42□□□□□ -0.42
CD40-207ENST00000620709 OVOL1O14753 267 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 SAP30O75446 220 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 IGHV3-11P01762 117 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 SLURP1P55000 103 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 RUNX1Q01196 453 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 ARPC1AQ92747 370 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 SH3BGRL3Q9H299 93 aa12.42□□□□□ -0.42
CD40-207ENST00000620709 LSM4Q9Y4Z0 139 aaKnown RBP12.42□□□□□ -0.42
CD40-207ENST00000620709 TENM3Q9P273 2699 aa12.41□□□□□ -0.42
CD40-207ENST00000620709 FNDC10F2Z333 226 aa12.41□□□□□ -0.42
CD40-207ENST00000620709 LINC01619G3V211 115 aa12.41□□□□□ -0.42
CD40-207ENST00000620709 SOX15O60248 233 aa12.41□□□□□ -0.42
CD40-207ENST00000620709 NMBP08949 121 aa12.41□□□□□ -0.42
CD40-207ENST00000620709 AREGP15514 252 aa12.41□□□□□ -0.42
CD40-207ENST00000620709 SULT1A2P50226 295 aa12.41□□□□□ -0.42
CD40-207ENST00000620709 OR2G3Q8NGZ4 309 aa12.41□□□□□ -0.42
CD40-207ENST00000620709 RNASEH2CQ8TDP1 164 aaKnown RBP12.41□□□□□ -0.42
CD40-207ENST00000620709 PCNPQ8WW12 178 aaKnown RBP12.41□□□□□ -0.42
CD40-207ENST00000620709 SMCO3A2RU48 225 aa12.4□□□□□ -0.42
CD40-207ENST00000620709 REG1AP05451 166 aa12.4□□□□□ -0.42
CD40-207ENST00000620709 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
CD40-207ENST00000620709 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.42
CD40-207ENST00000620709 FGF7P21781 194 aa12.4□□□□□ -0.42
CD40-207ENST00000620709 TPPP2P59282 170 aa12.4□□□□□ -0.42
CD40-207ENST00000620709 LFNGQ8NES3 379 aa12.4□□□□□ -0.42
CD40-207ENST00000620709 DLX4Q92988 240 aaPredicted RBP12.4□□□□□ -0.42
CD40-207ENST00000620709 PSMG3Q9BT73 122 aaPredicted RBP12.4□□□□□ -0.42
CD40-207ENST00000620709 ZNF355PQ9NSJ1 428 aa12.4□□□□□ -0.42
CD40-207ENST00000620709 WDR83OSQ9Y284 106 aa12.4□□□□□ -0.42
CD40-207ENST00000620709 U3KQK5 164 aa12.4□□□□□ -0.42
CD40-207ENST00000620709 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
CD40-207ENST00000620709 A0A087WW49 117 aa12.39□□□□□ -0.43
CD40-207ENST00000620709 LGALS1P09382 135 aaKnown RBP12.39□□□□□ -0.43
CD40-207ENST00000620709 RAB5CP51148 216 aa12.39□□□□□ -0.43
CD40-207ENST00000620709 INSL3P51460 131 aa12.39□□□□□ -0.43
CD40-207ENST00000620709 TMEM182Q6ZP80 229 aaPredicted RBP12.39□□□□□ -0.43
CD40-207ENST00000620709 OR1P1Q8NH06 330 aa12.39□□□□□ -0.43
CD40-207ENST00000620709 TIMM9Q9Y5J7 89 aa12.39□□□□□ -0.43
CD40-207ENST00000620709 F11RQ9Y624 299 aaKnown RBP12.39□□□□□ -0.43
CD40-207ENST00000620709 UMAD1C9J7I0 102 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 CORTO00230 105 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 MPDU1O75352 247 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 APELAP0DMC3 54 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 C19orf54Q5BKX5 351 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 PVRIGQ6DKI7 326 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 CACNG8Q8WXS5 425 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 RSG1Q9BU20 258 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 NPVFQ9HCQ7 196 aa12.38□□□□□ -0.43
CD40-207ENST00000620709 ZNF705EA8MWA4 302 aaPredicted RBP12.37□□□□□ -0.43
CD40-207ENST00000620709 C17orf112F2Z3M2 114 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 TRGV3P03979 118 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 GPX4P36969 197 aaPredicted RBP12.37□□□□□ -0.43
CD40-207ENST00000620709 CRIP2P52943 208 aaPredicted RBP12.37□□□□□ -0.43
CD40-207ENST00000620709 AKR1C1Q04828 323 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 AKR1C8PQ5T2L2 129 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 BTNL8Q6UX41 500 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 SLC16A13Q7RTY0 426 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 OR5T1Q8NG75 326 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 OR1L6Q8NGR2 347 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 SAT2Q96F10 170 aaPredicted RBP12.37□□□□□ -0.43
CD40-207ENST00000620709 NPCDR1Q9BY65 106 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 PLA2G2EQ9NZK7 142 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 LINC00862A6NCI5 91 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 CTRB1P17538 263 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 OPRK1P41145 380 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 BLOC1S1P78537 153 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 SERF2P84101 59 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 AKIRIN2Q53H80 203 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 CTRB2Q6GPI1 263 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 ETFRF1Q6IPR1 90 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 ZNF709Q8N972 641 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 SLC35E1Q96K37 410 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 SMAD5-AS1Q9Y6J3 95 aa12.37□□□□□ -0.43
CD40-207ENST00000620709 NPIPB5A8MRT5 1133 aa12.36□□□□□ -0.43
CD40-207ENST00000620709 PRH1P02810 166 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms