RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 DDB2Q92466 427 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 FOXB1Q99853 325 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 C1QTNF4Q9BXJ3 329 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 RAB1BQ9H0U4 201 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 LIN7CQ9NUP9 197 aaKnown RBP8.5□□□□□ -1.05
VPS11-207ENST00000620429 KCNS2Q9ULS6 477 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 MT-ATP8P03928 68 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 COX6A1P12074 109 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 EDDM3BP56851 147 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 KRTAP27-1Q3LI81 207 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 C20orf204Q6ZNR8 217 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 ATP5L2Q7Z4Y8 100 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 ARPC1AQ92747 370 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 C20orf78Q9BR46 151 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 THBDP07204 575 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 ID1P41134 155 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 VDAC2P45880 294 aaPredicted RBP8.49□□□□□ -1.05
VPS11-207ENST00000620429 IL11RAQ14626 422 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 ESPL1Q14674 2120 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 IMMP1LQ96LU5 166 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 TRIB1Q96RU8 372 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 C1QTNF5Q9BXJ0 243 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 DCHS1Q96JQ0 3298 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 E9PLD3 99 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 PCBD1P61457 104 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 MKXQ8IYA7 352 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 NUP35Q8NFH5 326 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 ATP6V0E2Q8NHE4 81 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 PHLDA1Q8WV24 401 aaPredicted RBP8.49□□□□□ -1.05
VPS11-207ENST00000620429 FGF23Q9GZV9 251 aaPredicted RBP8.49□□□□□ -1.05
VPS11-207ENST00000620429 DEPPQ9NTK1 212 aa8.49□□□□□ -1.05
VPS11-207ENST00000620429 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 IGLV2-14P01704 120 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 ZNF883P0CG24 379 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 SPINK2P20155 84 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 INSL3P51460 131 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 TAS2R45P59539 299 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 ABHD17BQ5VST6 288 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 FAM231DQ6ZW35 169 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 FGFRL1Q8N441 504 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 SYT8Q8NBV8 401 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 C18orf15Q96N68 181 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 PROK2Q9HC23 129 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 OR1A1Q9P1Q5 309 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 PRO0461Q9UI25 63 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 INSIG2Q9Y5U4 225 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 MPC1Q9Y5U8 109 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 IGF2BP2-AS1Q96M15 143 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 MCRIP2Q9BUT9 160 aaKnown RBP8.48□□□□□ -1.05
VPS11-207ENST00000620429 IDI2-AS1Q9NZ38 188 aa8.48□□□□□ -1.05
VPS11-207ENST00000620429 CDX4O14627 284 aaPredicted RBP8.47□□□□□ -1.05
VPS11-207ENST00000620429 IGHV3-9P01782 118 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 IGHG4P01861 327 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 P0C879 139 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 XGP55808 180 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 FOXI1Q12951 378 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 ZNF146Q15072 292 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 RTL8BQ17RB0 113 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 YRDCQ86U90 279 aaKnown RBP8.47□□□□□ -1.05
VPS11-207ENST00000620429 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
VPS11-207ENST00000620429 ZNF488Q96MN9 340 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 TMEM133Q9H2Q1 129 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 MBNL3Q9NUK0 354 aaKnown RBP8.47□□□□□ -1.05
VPS11-207ENST00000620429 C3orf80F5H4A9 247 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 CXCL13O43927 109 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 WISP2O76076 250 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 NHLRC4P0CG21 123 aaPredicted RBP8.47□□□□□ -1.05
VPS11-207ENST00000620429 SPATA46Q5T0L3 261 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 Q6ZS92 163 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 FAM168AQ92567 244 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 CITED1Q99966 193 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 SPANXA1Q9NS26 97 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 FREM1Q5H8C1 2179 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 NCKAP5O14513 1909 aa8.47□□□□□ -1.05
VPS11-207ENST00000620429 A0A087WX48 190 aa8.46□□□□□ -1.05
VPS11-207ENST00000620429 ZG16O60844 167 aa8.46□□□□□ -1.05
VPS11-207ENST00000620429 PF4V1P10720 104 aa8.46□□□□□ -1.05
VPS11-207ENST00000620429 GAGE13Q4V321 117 aa8.46□□□□□ -1.05
VPS11-207ENST00000620429 UBALD1Q8TB05 177 aa8.46□□□□□ -1.05
VPS11-207ENST00000620429 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.46□□□□□ -1.05
VPS11-207ENST00000620429 TEX50A0A1B0GTY4 177 aa8.46□□□□□ -1.06
VPS11-207ENST00000620429 NPIPB11E5RHQ5 1161 aa8.46□□□□□ -1.06
VPS11-207ENST00000620429 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.46□□□□□ -1.06
VPS11-207ENST00000620429 Q0VFX4 171 aa8.46□□□□□ -1.06
VPS11-207ENST00000620429 Q6AWC8 147 aa8.46□□□□□ -1.06
VPS11-207ENST00000620429 PRDM14Q9GZV8 571 aa8.46□□□□□ -1.06
VPS11-207ENST00000620429 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.45□□□□□ -1.06
VPS11-207ENST00000620429 CFHR2P36980 270 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 SSR4P51571 173 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 RPS16P62249 146 aaKnown RBP8.45□□□□□ -1.06
VPS11-207ENST00000620429 ZFAND6Q6FIF0 208 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 RPS19BP1Q86WX3 136 aaKnown RBP8.45□□□□□ -1.06
VPS11-207ENST00000620429 OSR1Q8TAX0 266 aaPredicted RBP8.45□□□□□ -1.06
VPS11-207ENST00000620429 USF3Q68DE3 2245 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 TRBV6-6A0A0A6YYG2 114 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 TRAV24A0A0B4J272 114 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 GAGE12JA6NER3 117 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 GAGE7O76087 117 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 APOMO95445 188 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms