RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MYL12BO14950 172 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 ZNF767PQ75MW2 155 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 GBGT1Q8N5D6 347 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 ZFP41Q8N8Y5 198 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 ZNF555Q8NEP9 628 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 LINC00467Q9BRT7 94 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 A0A0B4J293 547 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 ZNF688P0C7X2 276 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 P0C879 139 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 ID1P41134 155 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 CBX5P45973 191 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 MEOX2P50222 304 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 RASSF2P50749 326 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 GNGT1P63211 74 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 RRN3P1Q2M238 152 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 SSX7Q7RTT5 188 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 HOGA1Q86XE5 327 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 OR4C16Q8NGL9 310 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 SVIPQ8NHG7 77 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 RNF125Q96EQ8 232 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 C16orf74Q96GX8 76 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 RABAC1Q9UI14 185 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 V9GY05 133 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 IGHV3-35A0A0C4DH35 117 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 RPS10-NUDT3A0A1W2PQS6 291 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 SNAPC5O75971 98 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 PPYP01298 95 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 SLC25A4P12235 298 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 F2RP25116 425 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 LINC00315P59091 139 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 RPS25P62851 125 aaKnown RBP3.14□□□□□ -1.91
SNCA-213ENST00000618500 DLK1P80370 383 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 RNASE12Q5GAN4 147 aaKnown RBP3.14□□□□□ -1.91
SNCA-213ENST00000618500 PSMG4Q5JS54 123 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 AMTNQ6UX39 209 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 ZNF493Q6ZR52 646 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 TPRA1Q86W33 373 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 STXBP6Q8NFX7 210 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 FNDC4Q9H6D8 234 aaPredicted RBP3.14□□□□□ -1.91
SNCA-213ENST00000618500 CACFD1Q9UGQ2 172 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 SLC45A2Q9UMX9 530 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 SUB1P53999 127 aaKnown RBP eCLIP3.13□□□□□ -1.91
SNCA-213ENST00000618500 SUPT4H1P63272 117 aaKnown RBP3.13□□□□□ -1.91
SNCA-213ENST00000618500 ERHP84090 104 aaKnown RBP3.13□□□□□ -1.91
SNCA-213ENST00000618500 ST3GAL4Q11206 333 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 TMEM69Q5SWH9 247 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 DHRS11Q6UWP2 260 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 TMEM91Q6ZNR0 172 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 DMBX1Q8NFW5 382 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 UFD1Q92890 307 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 RRNAD1Q96FB5 475 aaKnown RBP3.13□□□□□ -1.91
SNCA-213ENST00000618500 ACOT13Q9NPJ3 140 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 XCL2Q9UBD3 114 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 DMBT1Q9UGM3 2413 aaPredicted RBP3.13□□□□□ -1.91
SNCA-213ENST00000618500 A0A0J9YX75 114 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 A0A1W2PPK0 400 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 NOTOA8MTQ0 251 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 ISLRO14498 428 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 SSX5O60225 188 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 B3GALNT1O75752 331 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 DUSP14O95147 198 aaKnown RBP3.13□□□□□ -1.91
SNCA-213ENST00000618500 INSP01308 110 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 HSPE1P61604 102 aaKnown RBP3.13□□□□□ -1.91
SNCA-213ENST00000618500 CLINT1Q14677 625 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 TDRG1Q3Y452 100 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 OR2B11Q5JQS5 317 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 SIGLEC15Q6ZMC9 328 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 LRTM2Q8N967 370 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 RNASEH2CQ8TDP1 164 aaKnown RBP3.13□□□□□ -1.91
SNCA-213ENST00000618500 MOB3AQ96BX8 217 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 PLGRKTQ9HBL7 147 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 CCL28Q9NRJ3 127 aa3.13□□□□□ -1.91
SNCA-213ENST00000618500 IFITM5A6NNB3 132 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 CASQ2O14958 399 aaPredicted RBP3.12□□□□□ -1.91
SNCA-213ENST00000618500 BUB3O43684 328 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 M6PRP20645 277 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 CALRP27797 417 aaKnown RBP3.12□□□□□ -1.91
SNCA-213ENST00000618500 TAS2R60P59551 318 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 MLLT11Q13015 90 aaPredicted RBP3.12□□□□□ -1.91
SNCA-213ENST00000618500 SMN1Q16637 294 aaKnown RBP3.12□□□□□ -1.91
SNCA-213ENST00000618500 ZIK1Q3SY52 487 aaPredicted RBP3.12□□□□□ -1.91
SNCA-213ENST00000618500 C1orf146Q5VVC0 180 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 OR52E5Q8NH55 327 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 FAM107BQ9H098 131 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 SULT1C2O00338 296 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 IGKV1-17P01599 117 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 RNASE2P10153 161 aaKnown RBP3.12□□□□□ -1.91
SNCA-213ENST00000618500 NFYAP23511 347 aaPredicted RBP3.12□□□□□ -1.91
SNCA-213ENST00000618500 RND3P61587 244 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 LAIR2Q6ISS4 152 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 SEC22AQ96IW7 307 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 ABHD1Q96SE0 405 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 SLC5A7Q9GZV3 580 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 AMBNQ9NP70 447 aa3.12□□□□□ -1.91
SNCA-213ENST00000618500 EBAG9O00559 213 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 PGLYRP1O75594 196 aaPredicted RBP3.11□□□□□ -1.91
SNCA-213ENST00000618500 CIB2O75838 187 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 IGLC1P0CG04 106 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 HSMCR30P0CW71 290 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 UCP3P55916 312 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms