RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 EFNB3Q15768 340 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 WFDC3Q8IUB2 231 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 MTURNQ8N3F0 131 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 S4R3C0 116 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 LRP4O75096 1905 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 ANOS1P23352 680 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 GCHFRP30047 84 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 TMEM144Q7Z5S9 345 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 FBXL7Q9UJT9 491 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 WIPF3A6NGB9 483 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 RRHO14718 337 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 AMY1AP04745 511 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 LINC00205P59089 165 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 SEM1Q6ZVN7 128 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 VMO1Q7Z5L0 202 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 OR10AG1Q8NH19 301 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 MALRD1Q5VYJ5 2156 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 TRGV3P03979 118 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 PRSS2P07478 247 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 ARL6IP6Q8N6S5 226 aa11.4□□□□□ -0.58
CIITA-213ENST00000618327 CRYBB3P26998 211 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 TMEM177Q53S58 311 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 DNLZQ5SXM8 178 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 LINC00305Q7Z4B0 112 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 BPESC1Q9GZL8 116 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 C21orf62Q9NYP8 219 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 TRAV40A0A0B4J280 105 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 GPX4P36969 197 aaPredicted RBP11.39□□□□□ -0.59
CIITA-213ENST00000618327 KLRD1Q13241 179 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 Q6ZSR3 168 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 DYNLRB2Q8TF09 96 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 PEF1Q9UBV8 284 aaKnown RBP11.39□□□□□ -0.59
CIITA-213ENST00000618327 TRBV9A0A0B4J1U6 114 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 IGHV1-3A0A0C4DH29 117 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 M0R1W7 72 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 CBLN1P23435 193 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 FOXA2Q9Y261 457 aaPredicted RBP11.39□□□□□ -0.59
CIITA-213ENST00000618327 A6NNC1 897 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 FAM106AQ4KMX7 169 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 SSC4DQ8WTU2 575 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 PGLYRP4Q96LB8 373 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 WFDC1Q9HC57 220 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 ZNF257Q9Y2Q1 563 aa11.39□□□□□ -0.59
CIITA-213ENST00000618327 PCNTO95613 3336 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 YLPM1P49750 1951 aaKnown RBP11.38□□□□□ -0.59
CIITA-213ENST00000618327 A0A1B0GV72 72 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 RELQ04864 619 aaPredicted RBP11.38□□□□□ -0.59
CIITA-213ENST00000618327 ZNF506Q5JVG8 444 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 Q8NFD4 153 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 IGHV3-23P01764 117 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 ID1P41134 155 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 SRSF4Q08170 494 aaKnown RBP11.38□□□□□ -0.59
CIITA-213ENST00000618327 H3BTX0 84 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 GATA2P23769 480 aaPredicted RBP11.38□□□□□ -0.59
CIITA-213ENST00000618327 TPTE2P1Q5T6R2 138 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 SFRP2Q96HF1 295 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 H0YJW9 148 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 ITGB1BP1O14713 200 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 VENTXO95231 258 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 GRNP28799 593 aaKnown RBP11.38□□□□□ -0.59
CIITA-213ENST00000618327 DUX4L9Q6RFH8 374 aaPredicted RBP11.38□□□□□ -0.59
CIITA-213ENST00000618327 CENPVQ7Z7K6 275 aaPredicted RBP11.38□□□□□ -0.59
CIITA-213ENST00000618327 OR10W1Q8NGF6 305 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 KCNS1Q96KK3 526 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 C16orf92Q96LL3 132 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 LIME1Q9H400 295 aa11.38□□□□□ -0.59
CIITA-213ENST00000618327 F11RQ9Y624 299 aaKnown RBP11.38□□□□□ -0.59
CIITA-213ENST00000618327 C10orf55Q5SWW7 151 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 NEU1Q99519 415 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 TRAV3A0A0B4J244 114 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 WNT2P09544 360 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 NPPCP23582 126 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 RAB9AP51151 201 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 TDGF1P3P51864 188 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 NCOR1P1Q9H4R4 102 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 BUB1B-PAK6H3BSN5 160 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 HOXA5P20719 270 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 CD69Q07108 199 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 TMEM78Q5T7P6 136 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 MINOS1Q5TGZ0 78 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 TEX36Q5VZQ5 186 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 TCF24Q7RTU0 167 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 MINOS1-NBL1R4GNA1 71 aa11.37□□□□□ -0.59
CIITA-213ENST00000618327 A0A0G2JRQ6 117 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 FGF23Q9GZV9 251 aaPredicted RBP11.36□□□□□ -0.59
CIITA-213ENST00000618327 OOSP1A8MZH6 123 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 EMP1P54849 157 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 PRSS8Q16651 343 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 ZNF585BQ52M93 769 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 NIT1Q86X76 327 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 C14orf144Q96I85 54 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 B4DSR2 109 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 DLX6P56179 175 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 LYPD6Q86Y78 171 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 Q8NA96 180 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms