RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 SERTAD4Q9NUC0 356 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 C21orf62Q9NYP8 219 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 PSMB11A5LHX3 300 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 TSPAN15O95858 294 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 RHOGP84095 191 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 PMS2P11Q13670 270 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
PDPN-211ENST00000617617 C9orf152Q5JTZ5 239 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 AKR1C8PQ5T2L2 129 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 ACSM6Q6P461 480 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 EEF1AKMT3Q96AZ1 226 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 SLC39A9Q9NUM3 307 aa9.14□□□□□ -0.95
PDPN-211ENST00000617617 YIF1AO95070 293 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 M6PRP20645 277 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 OR10J1P30954 320 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 SLC35B1P78383 322 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 STPG3Q8N7X2 389 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 RNF2Q99496 336 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 GSX1Q9H4S2 264 aaPredicted RBP9.13□□□□□ -0.95
PDPN-211ENST00000617617 PXMP4Q9Y6I8 212 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 A0A0G2JLM5 398 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 LOC105371267A0A1B0GV96 52 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 OR2J3O76001 311 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 TOMM40O96008 361 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 PRH1P02810 166 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 SPSB3Q6PJ21 355 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 TMEM182Q6ZP80 229 aaPredicted RBP9.13□□□□□ -0.95
PDPN-211ENST00000617617 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.13□□□□□ -0.95
PDPN-211ENST00000617617 INAFM1C9JVW0 142 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 IGKV1-17P01599 117 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 ATP5G2Q06055 141 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 C15orf32Q32M92 178 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 FFAR4Q5NUL3 377 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 Q6ZSV7 163 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 ACY3Q96HD9 319 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
PDPN-211ENST00000617617 TNFRSF19Q9NS68 423 aa9.13□□□□□ -0.95
PDPN-211ENST00000617617 B2MP61769 119 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 KIAA0141Q14154 515 aaPredicted RBP9.12□□□□□ -0.95
PDPN-211ENST00000617617 FAM74A1Q5RGS3 127 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 SUN5Q8TC36 379 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 RPRMQ9NS64 109 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 HIVEP1P15822 2718 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 ACANP16112 2415 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 MFSD2BA6NFX1 497 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 NDUFS6O75380 124 aaKnown RBP9.12□□□□□ -0.95
PDPN-211ENST00000617617 OR2C1O95371 312 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 ZNF343Q6P1L6 599 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 TEX38Q6PEX7 206 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 ZNF414Q96IQ9 312 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 RFNGQ9Y644 331 aa9.12□□□□□ -0.95
PDPN-211ENST00000617617 WI2-2373I1.2A0A1W2PRP0 233 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 FAM181BA6NEQ2 426 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 ZFP92A6NM28 416 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 ZNF705EA8MWA4 302 aaPredicted RBP9.11□□□□□ -0.95
PDPN-211ENST00000617617 OR5G3P0C626 314 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 RAB9AP51151 201 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 MIC13Q5XKP0 118 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 GATAD1Q8WUU5 269 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 MRPL32Q9BYC8 188 aaKnown RBP9.11□□□□□ -0.95
PDPN-211ENST00000617617 ELOA3CA0A087WX78 387 aaPredicted RBP9.11□□□□□ -0.95
PDPN-211ENST00000617617 TCF21O43680 179 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 TRGV3P03979 118 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 CTSGP08311 255 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 EIF4E3Q8N5X7 224 aaKnown RBP9.11□□□□□ -0.95
PDPN-211ENST00000617617 BPIFCQ8NFQ6 507 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 OR1L4Q8NGR5 311 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 PFDN5Q99471 154 aa9.11□□□□□ -0.95
PDPN-211ENST00000617617 CTXND1A0A1B0GTU2 59 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 IL34Q6ZMJ4 242 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 RPP25LQ8N5L8 163 aaKnown RBP9.1□□□□□ -0.95
PDPN-211ENST00000617617 OR10G4Q8NGN3 311 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 OR10G9Q8NGN4 311 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 OR10G7Q8NGN6 311 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 RCC1LQ96I51 464 aaKnown RBP9.1□□□□□ -0.95
PDPN-211ENST00000617617 ACTR3CQ9C0K3 210 aaPredicted RBP9.1□□□□□ -0.95
PDPN-211ENST00000617617 VSIRQ9H7M9 311 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 CYSRT1A8MQ03 144 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 GNG7O60262 68 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 HBE1P02100 147 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 TPPP2P59282 170 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 RAB2AP61019 212 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 ZNF726P1Q15940 193 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 Q6ZRG5 221 aa9.1□□□□□ -0.95
PDPN-211ENST00000617617 NSD1Q96L73 2696 aaPredicted RBP9.1□□□□□ -0.95
PDPN-211ENST00000617617 ZNF90Q03938 601 aa9.09□□□□□ -0.95
PDPN-211ENST00000617617 ZNF491Q8N8L2 437 aa9.09□□□□□ -0.95
PDPN-211ENST00000617617 UBE2E2Q96LR5 201 aa9.09□□□□□ -0.95
PDPN-211ENST00000617617 TGOLN2O43493 480 aa9.09□□□□□ -0.95
PDPN-211ENST00000617617 RHOBP62745 196 aa9.09□□□□□ -0.95
PDPN-211ENST00000617617 TMEM95Q3KNT9 176 aa9.09□□□□□ -0.95
PDPN-211ENST00000617617 TIGITQ495A1 244 aa9.09□□□□□ -0.95
PDPN-211ENST00000617617 MRPL27Q9P0M9 148 aaKnown RBP9.09□□□□□ -0.95
PDPN-211ENST00000617617 HIVEP2P31629 2446 aa9.09□□□□□ -0.95
PDPN-211ENST00000617617 CRYBA1P05813 215 aa9.09□□□□□ -0.96
PDPN-211ENST00000617617 ZNF616Q08AN1 781 aa9.09□□□□□ -0.96
PDPN-211ENST00000617617 Q56UQ5 140 aa9.09□□□□□ -0.96
PDPN-211ENST00000617617 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms