RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 BORCS7Q96B45 105 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 BET1LQ9NYM9 111 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 IL36BQ9NZH7 164 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 HSPB7Q9UBY9 170 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 HILPDAQ9Y5L2 63 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 LOC105371242A0A075B767 164 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 UQCRFS1P47985 274 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 RPEL1Q2QD12 228 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 FBLN7Q53RD9 439 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 IL19Q9UHD0 177 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 CD1BP29016 333 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 OR4A47Q6IF82 309 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 Q8N976 141 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 COMMD5Q9GZQ3 224 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 RNASE7Q9H1E1 156 aaKnown RBP11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 KCNIP2Q9NS61 270 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 ITPR1Q14643 2758 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 LDLRAD2Q5SZI1 272 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 TCF19Q9Y242 345 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 YTHDF2Q9Y5A9 579 aaKnown RBP11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 WNK1Q9H4A3 2382 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 IGHV3OR16-10A0A075B7F0 116 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 IGHV1-69-2A0A0G2JMI3 117 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 NPIPB11E5RHQ5 1161 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 ORAOV1Q8WV07 137 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 VKORC1Q9BQB6 163 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 ZNF355PQ9NSJ1 428 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 COX11Q9Y6N1 276 aa11.8□□□□□ -0.52
SHROOM1-208ENST00000617339 A0A1W2PS18 150 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 E7EQL1 145 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 CD99P14209 185 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 TSPOP30536 169 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 SPATA31B1PQ5VZV4 182 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 RAB1BQ9H0U4 201 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 RAB29O14966 203 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 MGST1P10620 155 aaKnown RBP11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 FAM216AQ8WUB2 273 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 RNASE6Q93091 150 aaKnown RBP11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 JPT1Q9UK76 154 aa11.79□□□□□ -0.52
SHROOM1-208ENST00000617339 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 CTRLP40313 264 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 TCTEX1D1Q8N7M0 179 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 NHLRC2Q8NBF2 726 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 ZC2HC1AQ96GY0 325 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 TNFRSF19Q9NS68 423 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 CFAP46Q8IYW2 2715 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 IGLV3-9A0A075B6K5 115 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 C15orf62A8K5M9 175 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 J3QR06 171 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 FOXH1O75593 365 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 PRB1P04280 392 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 CDKN1BP46527 198 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 ITGB1BP1O14713 200 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 CA2P00918 260 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 TMEM200BQ69YZ2 307 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 HCP5Q6MZN7 132 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 ZBTB34Q8NCN2 500 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 HARBI1Q96MB7 349 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 IDI2-AS1Q9NZ38 188 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 MTORP42345 2549 aa11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 HRNRQ86YZ3 2850 aaPredicted RBP11.78□□□□□ -0.52
SHROOM1-208ENST00000617339 NCBP2LA6PVI3 153 aaKnown RBP11.77□□□□□ -0.52
SHROOM1-208ENST00000617339 APOBEC3AP31941 199 aaPredicted RBP11.77□□□□□ -0.52
SHROOM1-208ENST00000617339 OR4S2Q8NH73 311 aa11.77□□□□□ -0.52
SHROOM1-208ENST00000617339 RPEQ96AT9 228 aa11.77□□□□□ -0.52
SHROOM1-208ENST00000617339 ZNF714Q96N38 554 aa11.77□□□□□ -0.52
SHROOM1-208ENST00000617339 OR51B2Q9Y5P1 312 aa11.77□□□□□ -0.52
SHROOM1-208ENST00000617339 H0Y8G0 127 aa11.77□□□□□ -0.53
SHROOM1-208ENST00000617339 KLHDC1Q8N7A1 406 aa11.77□□□□□ -0.53
SHROOM1-208ENST00000617339 KCNS1Q96KK3 526 aa11.77□□□□□ -0.53
SHROOM1-208ENST00000617339 PMS2P5A8MQ11 134 aa11.77□□□□□ -0.53
SHROOM1-208ENST00000617339 LHBP01229 141 aa11.77□□□□□ -0.53
SHROOM1-208ENST00000617339 OR10J4P0C629 311 aa11.77□□□□□ -0.53
SHROOM1-208ENST00000617339 ZNF788Q6ZQV5 615 aa11.77□□□□□ -0.53
SHROOM1-208ENST00000617339 PQLC2Q6ZP29 291 aa11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 RAB1CQ92928 201 aa11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 SSBP3Q9BWW4 388 aaPredicted RBP11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 CLEC7AQ9BXN2 247 aa11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 SLC25A17O43808 307 aa11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 ZNF324O75467 553 aaPredicted RBP11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 AARDQ4LEZ3 155 aa11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 ZNF439Q8NDP4 499 aa11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 TET2Q6N021 2002 aaPredicted RBP11.76□□□□□ -0.53
SHROOM1-208ENST00000617339 PSG1P11464 419 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 OR4P4Q8NGL7 312 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 RITA1Q96K30 269 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 JMJD1CQ15652 2540 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 CT45A6P0DMU7 189 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 CT45A5P0DMU8 189 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 CT45A7P0DMV0 189 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 IGFBP2P18065 325 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 PIGBOS1A0A0B4J2F0 54 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 NDUFS7O75251 213 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 NPY1RP25929 384 aa11.75□□□□□ -0.53
SHROOM1-208ENST00000617339 CRYBB3P26998 211 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms