RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 RNF2Q99496 336 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 CHEK1O14757 476 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 IFNA21P01568 189 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 H2AFB2P0C5Z0 115 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 SLC25A4P12235 298 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 NOXA1Q86UR1 476 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 DEFB125Q8N687 156 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 OR4D5Q8NGN0 318 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 RHPN1-AS1Q9BWJ2 59 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 PAIP2BQ9ULR5 123 aaKnown RBP12.53□□□□□ -0.4
CBWD3-211ENST00000615061 H3BP45 60 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 CCSO14618 274 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 MED6O75586 246 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 OR10J1P30954 320 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 POLR2GP62487 172 aaKnown RBP eCLIP12.53□□□□□ -0.4
CBWD3-211ENST00000615061 ID3Q02535 119 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 MZT2BQ6NZ67 158 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 LILRB2Q8N423 598 aa12.53□□□□□ -0.4
CBWD3-211ENST00000615061 IGHV3-66A0A0C4DH42 116 aa12.52□□□□□ -0.41
CBWD3-211ENST00000615061 ETFRF1Q6IPR1 90 aa12.52□□□□□ -0.41
CBWD3-211ENST00000615061 ST8SIA2Q92186 375 aa12.52□□□□□ -0.41
CBWD3-211ENST00000615061 TRAV25A0A0B4J276 109 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 A8MZ25 164 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 OR11H12B2RN74 326 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 TSPAN4O14817 238 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 NKX2-1P43699 371 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-211ENST00000615061 IAH1Q2TAA2 248 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-211ENST00000615061 ZNF431Q8TF32 576 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-211ENST00000615061 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 IGKV3-7A0A075B6H7 116 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 TRAV30A0A087WSZ9 112 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 SCGB1D2O95969 90 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 GAMTQ14353 236 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 SPANXN5Q5MJ07 72 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 OR1S2Q8NGQ3 325 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 CIB3Q96Q77 187 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-211ENST00000615061 TUBA4BQ9H853 241 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 GSKIPQ9P0R6 139 aa12.51□□□□□ -0.41
CBWD3-211ENST00000615061 SSSCA1O60232 199 aa12.5□□□□□ -0.41
CBWD3-211ENST00000615061 NHLRC4P0CG21 123 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-211ENST00000615061 ATP5IP56385 69 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-211ENST00000615061 LAMTOR1Q6IAA8 161 aa12.5□□□□□ -0.41
CBWD3-211ENST00000615061 NRARPQ7Z6K4 114 aa12.5□□□□□ -0.41
CBWD3-211ENST00000615061 ZBTB8BQ8NAP8 495 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-211ENST00000615061 ENKURQ8TC29 256 aa12.5□□□□□ -0.41
CBWD3-211ENST00000615061 DNAH7Q8WXX0 4024 aa12.5□□□□□ -0.41
CBWD3-211ENST00000615061 PRSS46E5RG02 174 aa12.49□□□□□ -0.41
CBWD3-211ENST00000615061 SCGB2A1O75556 95 aa12.49□□□□□ -0.41
CBWD3-211ENST00000615061 RAB11AP62491 216 aa12.49□□□□□ -0.41
CBWD3-211ENST00000615061 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
CBWD3-211ENST00000615061 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
CBWD3-211ENST00000615061 SRD5A3Q9H8P0 318 aa12.49□□□□□ -0.41
CBWD3-211ENST00000615061 UBQLN2Q9UHD9 624 aa12.49□□□□□ -0.41
CBWD3-211ENST00000615061 IGKV1D-37A0A075B6S9 117 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 FAM25EA8MYX2 175 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 GPX4P36969 197 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-211ENST00000615061 YPEL3P61236 119 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-211ENST00000615061 FAM90A2PQ658T7 463 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 C12orf45Q8N5I9 185 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-211ENST00000615061 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
CBWD3-211ENST00000615061 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
CBWD3-211ENST00000615061 DFFBO76075 338 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
CBWD3-211ENST00000615061 NPPCP23582 126 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 TFPI2P48307 235 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 PAX9P55771 341 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 ZNF90Q03938 601 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 USF2Q15853 346 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-211ENST00000615061 GBGT1Q8N5D6 347 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 Q8WTZ3 238 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 CITED4Q96RK1 184 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 PSENENQ9NZ42 101 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 RCL1Q9Y2P8 373 aaKnown RBP12.48□□□□□ -0.41
CBWD3-211ENST00000615061 U3KQK5 164 aa12.48□□□□□ -0.41
CBWD3-211ENST00000615061 IGKV1OR2-108A0A075B7D4 117 aa12.47□□□□□ -0.41
CBWD3-211ENST00000615061 IL4P05112 153 aa12.47□□□□□ -0.41
CBWD3-211ENST00000615061 PSG1P11464 419 aa12.47□□□□□ -0.41
CBWD3-211ENST00000615061 CRYBB3P26998 211 aa12.47□□□□□ -0.41
CBWD3-211ENST00000615061 HAGHQ16775 308 aa12.47□□□□□ -0.41
CBWD3-211ENST00000615061 ODF3L2Q3SX64 289 aa12.47□□□□□ -0.41
CBWD3-211ENST00000615061 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
CBWD3-211ENST00000615061 METTL26Q96S19 204 aa12.47□□□□□ -0.41
CBWD3-211ENST00000615061 STRAPQ9Y3F4 350 aaKnown RBP12.47□□□□□ -0.41
CBWD3-211ENST00000615061 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
CBWD3-211ENST00000615061 CCNKO75909 580 aa12.46□□□□□ -0.41
CBWD3-211ENST00000615061 TOMM40O96008 361 aa12.46□□□□□ -0.41
CBWD3-211ENST00000615061 MBPP02686 304 aaPredicted RBP12.46□□□□□ -0.41
CBWD3-211ENST00000615061 RD3LP0DJH9 198 aa12.46□□□□□ -0.41
CBWD3-211ENST00000615061 RPP30P78346 268 aaKnown RBP12.46□□□□□ -0.41
CBWD3-211ENST00000615061 LINC00322Q6ZN03 302 aaPredicted RBP12.46□□□□□ -0.41
CBWD3-211ENST00000615061 C5orf51A6NDU8 294 aa12.46□□□□□ -0.42
CBWD3-211ENST00000615061 AGRNO00468 2067 aa12.46□□□□□ -0.42
CBWD3-211ENST00000615061 TM2D3Q9BRN9 247 aa12.46□□□□□ -0.42
CBWD3-211ENST00000615061 OR4C46A6NHA9 309 aa12.45□□□□□ -0.42
CBWD3-211ENST00000615061 PMS2P5A8MQ11 134 aa12.45□□□□□ -0.42
CBWD3-211ENST00000615061 IL5P05113 134 aa12.45□□□□□ -0.42
CBWD3-211ENST00000615061 OR8G2PQ6IF36 304 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms