RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 IFI27P40305 119 aaPredicted RBP16.64■□□□□ 0.25
CTDP1-208ENST00000613122 TBL2Q9Y4P3 447 aaKnown RBP16.64■□□□□ 0.25
CTDP1-208ENST00000613122 SOD3P08294 240 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 ZNF474Q6S9Z5 364 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-208ENST00000613122 C3orf56Q8N813 242 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 GAFA1Q96PS6 74 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 SBF1O95248 1867 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 COL8A2P25067 703 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 B3GALT5-AS1P59052 145 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 ZNF415Q09FC8 603 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 ERVH48-1M5A8F1 160 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 TEX38Q6PEX7 206 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 SLC25A48Q6ZT89 311 aaKnown RBP16.63■□□□□ 0.25
CTDP1-208ENST00000613122 RALGAPA1Q6GYQ0 2036 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 NDUFS8O00217 210 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 PSPNO60542 156 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 LILRA1O75019 489 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 C10orf55Q5SWW7 151 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 SPSB3Q6PJ21 355 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 TCF23Q7RTU1 214 aa16.63■□□□□ 0.25
CTDP1-208ENST00000613122 RTTNQ86VV8 2226 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 CCL20P78556 96 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 NR2C2APQ86WQ0 139 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 OR9G4Q8NGQ1 327 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 VCX2Q9H322 139 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 SNRNP200O75643 2136 aaKnown RBP16.62■□□□□ 0.25
CTDP1-208ENST00000613122 TRAV9-1A0A075B6T8 112 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 IMMP2LQ96T52 175 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 RNF114Q9Y508 228 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 GVINP1Q7Z2Y8 2422 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 IGKV1D-8A0A087WSZ0 117 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 DPRXA6NFQ7 191 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 PRR30Q53SZ7 412 aaPredicted RBP16.62■□□□□ 0.25
CTDP1-208ENST00000613122 SELENOKQ9Y6D0 94 aa16.62■□□□□ 0.25
CTDP1-208ENST00000613122 IGKV1-27A0A075B6S5 117 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 A0A1W2PRE2 83 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 BUB1B-PAK6H3BSN5 160 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 KLHL30-AS1Q8NEE0 82 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 RNF222A6NCQ9 220 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 RNF223E7ERA6 249 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 NEUROG1Q92886 237 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 RBMY1BA6NDE4 496 aaKnown RBP16.61■□□□□ 0.25
CTDP1-208ENST00000613122 RBMY1EA6NEQ0 496 aaKnown RBP16.61■□□□□ 0.25
CTDP1-208ENST00000613122 RBMY1DP0C7P1 496 aaKnown RBP16.61■□□□□ 0.25
CTDP1-208ENST00000613122 RBMY1A1P0DJD3 496 aaKnown RBP16.61■□□□□ 0.25
CTDP1-208ENST00000613122 RBMY1CP0DJD4 496 aa16.61■□□□□ 0.25
CTDP1-208ENST00000613122 TRBV7-1A0A0A6YYK4 115 aa16.6■□□□□ 0.25
CTDP1-208ENST00000613122 IGKV3D-20A0A0C4DH25 116 aa16.6■□□□□ 0.25
CTDP1-208ENST00000613122 TCF21O43680 179 aa16.6■□□□□ 0.25
CTDP1-208ENST00000613122 C5orf64Q2M2E5 130 aa16.6■□□□□ 0.25
CTDP1-208ENST00000613122 EP300Q09472 2414 aaPredicted RBP16.6■□□□□ 0.25
CTDP1-208ENST00000613122 RNASE7Q9H1E1 156 aaKnown RBP16.6■□□□□ 0.25
CTDP1-208ENST00000613122 EFNB3Q15768 340 aa16.6■□□□□ 0.25
CTDP1-208ENST00000613122 CHCHD5Q9BSY4 110 aa16.6■□□□□ 0.25
CTDP1-208ENST00000613122 K7ERU9 68 aa16.6■□□□□ 0.25
CTDP1-208ENST00000613122 ID3Q02535 119 aa16.6■□□□□ 0.25
CTDP1-208ENST00000613122 INTS1Q8N201 2190 aaKnown RBP16.59■□□□□ 0.25
CTDP1-208ENST00000613122 LY6HO94772 140 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 PLP1P60201 277 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 TMEM155Q4W5P6 130 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 LCNL1Q6ZST4 164 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 FAM169BQ8N8A8 192 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 PRADC1Q9BSG0 188 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 NDUFA3O95167 84 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 Q5PR19 223 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 SCN8AQ9UQD0 1980 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 TMEM183AQ8IXX5 376 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 TRBV7-9A0A0J9YWB2 115 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 E7EQL1 145 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 J3QKU1 62 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 TTC9CQ8N5M4 171 aa16.59■□□□□ 0.25
CTDP1-208ENST00000613122 SMIM13P0DJ93 91 aa16.58■□□□□ 0.25
CTDP1-208ENST00000613122 RPL15P61313 204 aaKnown RBP16.58■□□□□ 0.25
CTDP1-208ENST00000613122 PPIFP30405 207 aaKnown RBP16.58■□□□□ 0.25
CTDP1-208ENST00000613122 RNF166Q96A37 237 aaPredicted RBP16.58■□□□□ 0.25
CTDP1-208ENST00000613122 USMG5Q96IX5 58 aa16.58■□□□□ 0.25
CTDP1-208ENST00000613122 SDK2Q58EX2 2172 aa16.58■□□□□ 0.25
CTDP1-208ENST00000613122 A0A1B0GWJ7 208 aa16.58■□□□□ 0.24
CTDP1-208ENST00000613122 PNRC2Q9NPJ4 139 aaKnown RBP16.58■□□□□ 0.24
CTDP1-208ENST00000613122 MPZP25189 248 aa16.58■□□□□ 0.24
CTDP1-208ENST00000613122 RNF126Q9BV68 326 aa16.58■□□□□ 0.24
CTDP1-208ENST00000613122 WDR83OSQ9Y284 106 aa16.58■□□□□ 0.24
CTDP1-208ENST00000613122 H0YJW9 148 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 RPL35AP18077 110 aaKnown RBP16.57■□□□□ 0.24
CTDP1-208ENST00000613122 ZNF98A6NK75 572 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 JKAMPQ9P055 326 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 C1QTNF9BB2RNN3 333 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 C1QTNF9P0C862 333 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 COTL1Q14019 142 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 CNOT1A5YKK6 2376 aaKnown RBP16.57■□□□□ 0.24
CTDP1-208ENST00000613122 KIR3DL3Q8N743 410 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 NUDT10Q8NFP7 164 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 KLHDC3Q9BQ90 382 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 LYPD2Q6UXB3 125 aa16.57■□□□□ 0.24
CTDP1-208ENST00000613122 DICER1Q9UPY3 1922 aaKnown RBP16.56■□□□□ 0.24
CTDP1-208ENST00000613122 PSG1P11464 419 aa16.56■□□□□ 0.24
CTDP1-208ENST00000613122 SRSF1Q07955 248 aaKnown RBP eCLIP16.56■□□□□ 0.24
CTDP1-208ENST00000613122 MRPL16Q9NX20 251 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms