RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 TMEM178BH3BS89 294 aa12.94□□□□□ -0.34
TNXB-208ENST00000611016 ID3Q02535 119 aa12.94□□□□□ -0.34
TNXB-208ENST00000611016 GNG5P63218 68 aa12.94□□□□□ -0.34
TNXB-208ENST00000611016 GTSCR1Q86UQ5 136 aa12.94□□□□□ -0.34
TNXB-208ENST00000611016 NR2C2APQ86WQ0 139 aa12.94□□□□□ -0.34
TNXB-208ENST00000611016 BMPERQ8N8U9 685 aa12.94□□□□□ -0.34
TNXB-208ENST00000611016 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 MLNRO43193 412 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 RPL23P62829 140 aaKnown RBP12.93□□□□□ -0.34
TNXB-208ENST00000611016 ESPL1Q14674 2120 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 A0A0A6YYD4 124 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 TRAV41A0A0B4J266 112 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 SRRM5B3KS81 715 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 ATOH7Q8N100 152 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 PRDM13Q9H4Q3 707 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 CD55P08174 381 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 C3orf36Q3SXR2 165 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 IGKV1-12A0A0C4DH73 117 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 B4DSR2 109 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 IGKV1D-12P01611 117 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
TNXB-208ENST00000611016 SELENOKQ9Y6D0 94 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 SRSF1Q07955 248 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNXB-208ENST00000611016 MBD3L1Q8WWY6 194 aa12.93□□□□□ -0.34
TNXB-208ENST00000611016 PAX8Q06710 450 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 DTX2Q86UW9 622 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
TNXB-208ENST00000611016 BRD3OSQ6XYD6 125 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 Q6ZS92 163 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 CHCHD1Q96BP2 118 aaKnown RBP12.92□□□□□ -0.34
TNXB-208ENST00000611016 SPTBN2O15020 2390 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 IGHV1-8P0DP01 117 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 NEUROG3Q9Y4Z2 214 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 HIGD1CA8MV81 97 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 MINOS1Q5TGZ0 78 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 OR10W1Q8NGF6 305 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 WFDC12Q8WWY7 111 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 WDR83OSQ9Y284 106 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 MINOS1-NBL1R4GNA1 71 aa12.92□□□□□ -0.34
TNXB-208ENST00000611016 TSPAN13O95857 204 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 GNB1LQ9BYB4 327 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 TMEM242Q9NWH2 141 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 NUDT11Q96G61 164 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 RNF126Q9BV68 326 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 TOMM7Q9P0U1 55 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 RPUSD1Q9UJJ7 312 aaKnown RBP12.91□□□□□ -0.34
TNXB-208ENST00000611016 FGF16O43320 207 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 TMEM50AO95807 157 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 KLHDC3Q9BQ90 382 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 A0A1B0GW64 132 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
TNXB-208ENST00000611016 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
TNXB-208ENST00000611016 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
TNXB-208ENST00000611016 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
TNXB-208ENST00000611016 CEP250Q9BV73 2442 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 IGKV1D-8A0A087WSZ0 117 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 HBDP02042 147 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 TYMSP04818 313 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 C10orf126Q8N4M7 172 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 OR5AN1Q8NGI8 311 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 SMPXQ9UHP9 88 aa12.91□□□□□ -0.34
TNXB-208ENST00000611016 SAP30O75446 220 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 CD33P20138 364 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 BTCP35070 178 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 FBLN7Q53RD9 439 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 BEND2Q8NDZ0 799 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 BEX4Q9NWD9 120 aaPredicted RBP12.9□□□□□ -0.34
TNXB-208ENST00000611016 INTS1Q8N201 2190 aaKnown RBP12.9□□□□□ -0.34
TNXB-208ENST00000611016 PYYP10082 97 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 GAS1P54826 345 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 CTAG1AP78358 180 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 TDGF1P13385 188 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 DTX1Q86Y01 620 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 PSG8Q9UQ74 426 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 CYSLTR1Q9Y271 337 aa12.9□□□□□ -0.34
TNXB-208ENST00000611016 RASL11AQ6T310 242 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 CRIM1Q9NZV1 1036 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 TPTE2P1Q5T6R2 138 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 C5orf30Q96GV9 206 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
TNXB-208ENST00000611016 H3BUX3 64 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 HEPN1Q6WQI6 88 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 IGKV1-27A0A075B6S5 117 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 IGHV1-3A0A0C4DH29 117 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 PCP4P48539 62 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 ATRAIDQ6UW56 229 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 LINC00469Q8N7U9 141 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 CACNA1GO43497 2377 aa12.89□□□□□ -0.35
TNXB-208ENST00000611016 TRAV1-1A0A0B4J248 108 aa12.88□□□□□ -0.35
TNXB-208ENST00000611016 TRBV6-6A0A0A6YYG2 114 aa12.88□□□□□ -0.35
TNXB-208ENST00000611016 PSPNO60542 156 aa12.88□□□□□ -0.35
TNXB-208ENST00000611016 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
TNXB-208ENST00000611016 TSKUQ8WUA8 353 aa12.88□□□□□ -0.35
TNXB-208ENST00000611016 C10orf55Q5SWW7 151 aa12.88□□□□□ -0.35
TNXB-208ENST00000611016 SLC25A20O43772 301 aa12.88□□□□□ -0.35
TNXB-208ENST00000611016 LHFPL4Q7Z7J7 247 aa12.88□□□□□ -0.35
TNXB-208ENST00000611016 KIR3DL3Q8N743 410 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms