RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TRAV5A0A0B4J249 113 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 A0A0G2JLM5 398 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 PSG9Q00887 426 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 HIST1H1AQ02539 215 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-218ENST00000610726 SPRNQ5BIV9 151 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 TMEM167AQ8TBQ9 72 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 RNF125Q96EQ8 232 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 CARHSP1Q9Y2V2 147 aaKnown RBP5.94□□□□□ -1.46
CSDE1-218ENST00000610726 SELENOKQ9Y6D0 94 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 CEP192Q8TEP8 1941 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 MUC22E2RYF6 1773 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-218ENST00000610726 TCRBV4S1A1TA0A5B7 111 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 B4DSR2 109 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 H3BUX3 64 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 TMEM50AO95807 157 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 LOXP28300 417 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-218ENST00000610726 RAB9AP51151 201 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 CX3CL1P78423 397 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 C3orf36Q3SXR2 165 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 TMEM155Q4W5P6 130 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 SP5Q6BEB4 398 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-218ENST00000610726 Q8TCH9 128 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 NEU1Q99519 415 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 MUC21A0A0G2JKD1 596 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 MUC21A0A140T8X8 626 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 TMEM8BA6NDV4 472 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 PEX7O00628 323 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 SOD3P08294 240 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 AREGP15514 252 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 PRTN3P24158 256 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 CFHR2P36980 270 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 MEOX2P50222 304 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 ZNF134P52741 427 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 GNG5P63218 68 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 MUC21Q5SSG8 566 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 SPATA31B1PQ5VZV4 182 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 C11orf53Q8IXP5 236 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 SIGLEC9Q9Y336 463 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 GOLT1BQ9Y3E0 138 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 A0A1W2PRX2 142 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 A6NNC1 897 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 C15orf62A8K5M9 175 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 GPX1P07203 203 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 C5orf64Q2M2E5 130 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 C17orf58Q2M2W7 97 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 SEPSECSQ9HD40 501 aaKnown RBP5.93□□□□□ -1.46
CSDE1-218ENST00000610726 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.93□□□□□ -1.46
CSDE1-218ENST00000610726 IGKV1-39P01597 117 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 HLA-DRB1P01911 266 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 PRB1P04280 392 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 IGKV1D-39P04432 117 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 CBLN1P23435 193 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 SAA4P35542 130 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 C2orf83Q53S99 150 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 KLHDC1Q8N7A1 406 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 OR1P1Q8NH06 330 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 NAV3Q8IVL0 2385 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 GRIFINA4D1Z8 144 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 CXorf65A6NEN9 183 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 SRSF4Q08170 494 aaKnown RBP5.93□□□□□ -1.46
CSDE1-218ENST00000610726 EIF4E3Q8N5X7 224 aaKnown RBP5.93□□□□□ -1.46
CSDE1-218ENST00000610726 SSC4DQ8WTU2 575 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 GPR61Q9BZJ8 451 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 NPFFR1Q9GZQ6 430 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 MRPL18Q9H0U6 180 aaKnown RBP5.93□□□□□ -1.46
CSDE1-218ENST00000610726 Q9H3A6 140 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 SDF2L1Q9HCN8 221 aa5.93□□□□□ -1.46
CSDE1-218ENST00000610726 M0R1W7 72 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 NPFFO15130 113 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 VENTXO95231 258 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 C15orf32Q32M92 178 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 LYPD6Q86Y78 171 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 JMJD1CQ15652 2540 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 FASNP49327 2511 aaKnown RBP5.92□□□□□ -1.46
CSDE1-218ENST00000610726 LAMA2P24043 3122 aaKnown RBP5.92□□□□□ -1.46
CSDE1-218ENST00000610726 SHISA9B4DS77 424 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 C15orf65H3BRN8 121 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-218ENST00000610726 GGCTO75223 188 aaKnown RBP5.92□□□□□ -1.46
CSDE1-218ENST00000610726 MT-ND6P03923 174 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 PSG1P11464 419 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 RPL23P62829 140 aaKnown RBP5.92□□□□□ -1.46
CSDE1-218ENST00000610726 DGAT2L7PQ6IED9 249 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 TMEM116Q8NCL8 245 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 MGST2Q99735 147 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 HLA-DQA1P01909 254 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 TRGC1P0CF51 173 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 CNTFRP26992 372 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 SRIP30626 198 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 DIAPH2-AS1Q14236 149 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 SMUG1Q53HV7 270 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 MINOS1Q5TGZ0 78 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 ZNF329Q86UD4 541 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 MBD3L1Q8WWY6 194 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 YTHDF2Q9Y5A9 579 aaKnown RBP5.92□□□□□ -1.46
CSDE1-218ENST00000610726 MINOS1-NBL1R4GNA1 71 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 DYSFO75923 2080 aa5.92□□□□□ -1.46
CSDE1-218ENST00000610726 RNF223E7ERA6 249 aa5.91□□□□□ -1.46
CSDE1-218ENST00000610726 RNF224P0DH78 156 aa5.91□□□□□ -1.46
CSDE1-218ENST00000610726 CKS2P33552 79 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms