RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 SMPXQ9UHP9 88 aa9.72□□□□□ -0.85
TP53-220ENST00000610623 PTPRBP23467 1997 aa9.71□□□□□ -0.85
TP53-220ENST00000610623 TRAV3A0A0B4J244 114 aa9.71□□□□□ -0.85
TP53-220ENST00000610623 ZNF561-AS1K7EIQ3 104 aa9.71□□□□□ -0.85
TP53-220ENST00000610623 SPINT2O43291 252 aa9.71□□□□□ -0.85
TP53-220ENST00000610623 PROP1O75360 226 aa9.71□□□□□ -0.85
TP53-220ENST00000610623 FTH1P19P0C7X4 201 aa9.71□□□□□ -0.85
TP53-220ENST00000610623 CEBPDP49716 269 aaPredicted RBP9.71□□□□□ -0.85
TP53-220ENST00000610623 FOXG1P55316 489 aaPredicted RBP9.71□□□□□ -0.85
TP53-220ENST00000610623 HSPE1P61604 102 aaKnown RBP9.71□□□□□ -0.85
TP53-220ENST00000610623 FOXA2Q9Y261 457 aaPredicted RBP9.71□□□□□ -0.85
TP53-220ENST00000610623 COL6A3P12111 3177 aa9.71□□□□□ -0.85
TP53-220ENST00000610623 BDP1A6H8Y1 2624 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 MYO15AQ9UKN7 3530 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 IGHV3-43A0A0B4J1X8 118 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 DEFB108AA8MXU0 73 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 VWC2LB2RUY7 222 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 IGHV3-43DP0DP04 118 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 VKORC1L1Q8N0U8 176 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 DEFB124Q8NES8 71 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 OR10AG1Q8NH19 301 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 S1PR3Q99500 378 aa9.71□□□□□ -0.86
TP53-220ENST00000610623 TET2Q6N021 2002 aaPredicted RBP9.7□□□□□ -0.86
TP53-220ENST00000610623 SPEGQ15772 3267 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 VSTM2AQ8TAG5 236 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 LRRC29Q8WV35 223 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 ZC2HC1AQ96GY0 325 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 LINC00479Q96M42 142 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 TRGV5A0A0B4J1U4 118 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 A0A0G2JLM5 398 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 A0A1B0GV72 72 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 H3BUT2 72 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 PEX7O00628 323 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 PPIAL4GP0DN37 164 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 FOXA3P55318 350 aaPredicted RBP9.7□□□□□ -0.86
TP53-220ENST00000610623 JMJD8Q96S16 334 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 NPFFR1Q9GZQ6 430 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 C7orf69Q9H7B7 122 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 TMEM14BQ9NUH8 114 aa9.7□□□□□ -0.86
TP53-220ENST00000610623 ATP5IP56385 69 aaPredicted RBP9.69□□□□□ -0.86
TP53-220ENST00000610623 PLP1P60201 277 aa9.69□□□□□ -0.86
TP53-220ENST00000610623 UBE2L3P68036 154 aaKnown RBP9.69□□□□□ -0.86
TP53-220ENST00000610623 ATP1A1-AS1Q5TC04 95 aa9.69□□□□□ -0.86
TP53-220ENST00000610623 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
TP53-220ENST00000610623 OR13A1Q8NGR1 328 aa9.69□□□□□ -0.86
TP53-220ENST00000610623 RFESDQ8TAC1 157 aa9.69□□□□□ -0.86
TP53-220ENST00000610623 CACNA1DQ01668 2161 aa9.69□□□□□ -0.86
TP53-220ENST00000610623 GPR179Q6PRD1 2367 aa9.69□□□□□ -0.86
TP53-220ENST00000610623 NCOR1O75376 2440 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 A8MWL6 223 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 C15orf65H3BRN8 121 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 FAM167A-AS1Q96KT0 104 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 CDIP1Q9H305 208 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 FREM1Q5H8C1 2179 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 IGKV1OR2-108A0A075B7D4 117 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 GNG7O60262 68 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 GRPP07492 148 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 Q6ZR03 302 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 C1orf229Q6ZS94 237 aaPredicted RBP9.68□□□□□ -0.86
TP53-220ENST00000610623 ZNF329Q86UD4 541 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 NANOS1Q8WY41 292 aaKnown RBP9.68□□□□□ -0.86
TP53-220ENST00000610623 SIGMAR1Q99720 223 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 SLC25A2Q9BXI2 301 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 DEFB127Q9H1M4 99 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 JPT1Q9UK76 154 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 PCNX2A6NKB5 2137 aa9.68□□□□□ -0.86
TP53-220ENST00000610623 SPAARA0A1B0GVQ0 90 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 PSMB11A5LHX3 300 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 TMEM189A5PLL7 270 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 SIVA1O15304 175 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 FAM87AP0C7U9 286 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 FGF6P10767 208 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 HSD52Q0P140 79 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 C3AR1Q16581 482 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 ASPHD1Q5U4P2 390 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 TPRX1Q8N7U7 411 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 OR9G4Q8NGQ1 327 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 GFRA4Q9GZZ7 299 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 RPP21Q9H633 154 aaKnown RBP9.67□□□□□ -0.86
TP53-220ENST00000610623 SPRR3Q9UBC9 169 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 MED13Q9UHV7 2174 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 A0A1W2PPM0 123 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 UQCRFS1P47985 274 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 KIR3DS1Q14943 382 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 CXorf67Q86X51 503 aaPredicted RBP9.67□□□□□ -0.86
TP53-220ENST00000610623 TEX45Q8NA69 505 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 DDB2Q92466 427 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 PRSS22Q9GZN4 317 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 FAM234AQ9H0X4 552 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 RABAC1Q9UI14 185 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 SH3BGRL2Q9UJC5 107 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
TP53-220ENST00000610623 F2RL2O00254 374 aa9.66□□□□□ -0.86
TP53-220ENST00000610623 TBC1D28Q2M2D7 210 aa9.66□□□□□ -0.86
TP53-220ENST00000610623 C3orf36Q3SXR2 165 aa9.66□□□□□ -0.86
TP53-220ENST00000610623 IGFL2Q6UWQ7 119 aa9.66□□□□□ -0.86
TP53-220ENST00000610623 ACP7Q6ZNF0 438 aa9.66□□□□□ -0.86
TP53-220ENST00000610623 FAM90A1Q86YD7 464 aa9.66□□□□□ -0.86
TP53-220ENST00000610623 GNG12Q9UBI6 72 aa9.66□□□□□ -0.86
TP53-220ENST00000610623 AHCTF1Q8WYP5 2266 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms