RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 NUDCD2Q8WVJ2 157 aa6.3□□□□□ -1.4
CTCFL-220ENST00000608858 FCAMRQ8WWV6 532 aa6.3□□□□□ -1.4
CTCFL-220ENST00000608858 UPK3BQ9BT76 320 aa6.3□□□□□ -1.4
CTCFL-220ENST00000608858 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
CTCFL-220ENST00000608858 WDR12Q9GZL7 423 aaKnown RBP6.3□□□□□ -1.4
CTCFL-220ENST00000608858 NRN1Q9NPD7 142 aa6.3□□□□□ -1.4
CTCFL-220ENST00000608858 U3KQE9 123 aa6.3□□□□□ -1.4
CTCFL-220ENST00000608858 MYL12BO14950 172 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 SIVA1O15304 175 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 HOXA5P20719 270 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 HOXA1P49639 335 aaPredicted RBP6.29□□□□□ -1.4
CTCFL-220ENST00000608858 PAX9P55771 341 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 CATR1Q13166 79 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 TMEM91Q6ZNR0 172 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 TSPAN14Q8NG11 270 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 OR13F1Q8NGS4 319 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 RXFP4Q8TDU9 374 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 ANXA10Q9UJ72 324 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 PRNDQ9UKY0 176 aa6.29□□□□□ -1.4
CTCFL-220ENST00000608858 PLAC8L1A1L4L8 177 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 HNRNPCP07910 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
CTCFL-220ENST00000608858 M6PRP20645 277 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 DTYMKP23919 212 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 ERHP84090 104 aaKnown RBP6.28□□□□□ -1.4
CTCFL-220ENST00000608858 DHODHQ02127 395 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 KCTD21Q4G0X4 260 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 EBLN2Q6P2I7 272 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 SIGLEC15Q6ZMC9 328 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 TMEM17Q86X19 198 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 ZNF555Q8NEP9 628 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 NOP10Q9NPE3 64 aaKnown RBP6.28□□□□□ -1.4
CTCFL-220ENST00000608858 MED4Q9NPJ6 270 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 FKBP11Q9NYL4 201 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 V9GY05 133 aa6.28□□□□□ -1.4
CTCFL-220ENST00000608858 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 TRAV12-2A0A075B6T6 113 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 TMEM235A6NFC5 223 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 ZNF701M0R085 212 aaPredicted RBP6.27□□□□□ -1.41
CTCFL-220ENST00000608858 M0R2Z0 102 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 SSX5O60225 188 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 CLN5O75503 358 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 PPYP01298 95 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 IGKV1-17P01599 117 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 RLN1P04808 185 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 CALRP27797 417 aaKnown RBP6.27□□□□□ -1.41
CTCFL-220ENST00000608858 SNCAP37840 140 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 OR10A3P58181 314 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 ARPC4P59998 168 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 ZNF79Q15937 498 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 SPINK13Q1W4C9 94 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 IZUMO4Q1ZYL8 232 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 HACD4Q5VWC8 232 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 FOXI2Q6ZQN5 318 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 AHSA2Q719I0 299 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 ZBTB34Q8NCN2 500 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 OR4A16Q8NH70 328 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 COQ8AQ8NI60 647 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 Q8WTZ3 238 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 IGF2BP2-AS1Q96M15 143 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 CLUHP3Q96NS8 147 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 ABHD1Q96SE0 405 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 LINC01587Q99440 93 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 COMMD9Q9P000 198 aa6.27□□□□□ -1.41
CTCFL-220ENST00000608858 METTL21EPA6NDL7 271 aa6.26□□□□□ -1.41
CTCFL-220ENST00000608858 PGLYRP1O75594 196 aaPredicted RBP6.26□□□□□ -1.41
CTCFL-220ENST00000608858 FGF2P09038 288 aa6.26□□□□□ -1.41
CTCFL-220ENST00000608858 ELK1P19419 428 aa6.26□□□□□ -1.41
CTCFL-220ENST00000608858 F2RP25116 425 aa6.26□□□□□ -1.41
CTCFL-220ENST00000608858 RPS25P62851 125 aaKnown RBP6.26□□□□□ -1.41
CTCFL-220ENST00000608858 NFE4Q86UQ8 179 aa6.26□□□□□ -1.41
CTCFL-220ENST00000608858 SCPEP1Q9HB40 452 aa6.26□□□□□ -1.41
CTCFL-220ENST00000608858 KLK11Q9UBX7 282 aa6.26□□□□□ -1.41
CTCFL-220ENST00000608858 A0A096LPF7 62 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 A0A0J9YX75 114 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 GAGE12BA1L429 117 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 CRXO43186 299 aaPredicted RBP6.25□□□□□ -1.41
CTCFL-220ENST00000608858 BUB3O43684 328 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 GAGE7O76087 117 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 NXPH4O95158 308 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 IL4P05112 153 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 GAGE12FP0CL80 117 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 GAGE12GP0CL81 117 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 GAGE12IP0CL82 117 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 UCP1P25874 307 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 ID1P41134 155 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 OPRK1P41145 380 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 GNG2P59768 71 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 HSPE1P61604 102 aaKnown RBP6.25□□□□□ -1.41
CTCFL-220ENST00000608858 PRCDQ00LT1 54 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 ID3Q02535 119 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 BAP18Q8IXM2 172 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 CYGBQ8WWM9 190 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 C20orf173Q96LM9 149 aa6.25□□□□□ -1.41
CTCFL-220ENST00000608858 SEPSECSQ9HD40 501 aaKnown RBP6.25□□□□□ -1.41
CTCFL-220ENST00000608858 SMIM30A4D0T7 59 aa6.24□□□□□ -1.41
CTCFL-220ENST00000608858 NPIPB6E9PJ23 425 aa6.24□□□□□ -1.41
CTCFL-220ENST00000608858 HSMCR30P0CW71 290 aa6.24□□□□□ -1.41
CTCFL-220ENST00000608858 ETV6P41212 452 aa6.24□□□□□ -1.41
CTCFL-220ENST00000608858 KRTAP10-4P60372 401 aaPredicted RBP6.24□□□□□ -1.41
CTCFL-220ENST00000608858 IGFL4Q6B9Z1 124 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms