RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SGK494Q96LW2 274 aa10.28□□□□□ -0.76
CTCFL-218ENST00000608440 COL25A1Q9BXS0 654 aaPredicted RBP10.28□□□□□ -0.76
CTCFL-218ENST00000608440 YAE1D1Q9NRH1 226 aa10.28□□□□□ -0.76
CTCFL-218ENST00000608440 DYSFO75923 2080 aa10.28□□□□□ -0.76
CTCFL-218ENST00000608440 NPIPB5A8MRT5 1133 aa10.27□□□□□ -0.76
CTCFL-218ENST00000608440 C17orf98A8MV24 154 aa10.27□□□□□ -0.76
CTCFL-218ENST00000608440 HBBP68871 147 aa10.27□□□□□ -0.76
CTCFL-218ENST00000608440 C1orf210Q8IVY1 113 aa10.27□□□□□ -0.76
CTCFL-218ENST00000608440 ZNF747Q9BV97 191 aa10.27□□□□□ -0.76
CTCFL-218ENST00000608440 TTTY13Q9BZ97 58 aa10.27□□□□□ -0.76
CTCFL-218ENST00000608440 ASXL3Q9C0F0 2248 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 IGHV3-20A0A0C4DH32 117 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 LILRA5A6NI73 299 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 MPDU1O75352 247 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 ABHD12Q8N2K0 398 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 TMEM105Q8N8V8 129 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 ZNF716A6NP11 495 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 DHHO43323 396 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 CFIP05156 583 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 C17orf82Q86X59 251 aaPredicted RBP10.27□□□□□ -0.77
CTCFL-218ENST00000608440 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 FGFBP3Q8TAT2 258 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 PGLYRP4Q96LB8 373 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 LOXL2Q9Y4K0 774 aa10.27□□□□□ -0.77
CTCFL-218ENST00000608440 hCG_38984A0A1B0GV85 526 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.26□□□□□ -0.77
CTCFL-218ENST00000608440 CRYGSP22914 178 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 FOXI1Q12951 378 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 HES3Q5TGS1 186 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 YRDCQ86U90 279 aaKnown RBP10.26□□□□□ -0.77
CTCFL-218ENST00000608440 TMEM178AQ8NBL3 297 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 KLRF1Q9NZS2 232 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 A0A1B0GXF2 115 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 MGST3O14880 152 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 FXYD7P58549 80 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 CACNG7P62955 275 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 LPAL2Q16609 132 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 FAM169BQ8N8A8 192 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 C1orf159Q96HA4 380 aa10.26□□□□□ -0.77
CTCFL-218ENST00000608440 HSD17B10Q99714 261 aaKnown RBP10.26□□□□□ -0.77
CTCFL-218ENST00000608440 TRBV20-1A0A075B6N2 111 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 TRAV24A0A0B4J272 114 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 CCDC179H3BU77 68 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
CTCFL-218ENST00000608440 P0C879 139 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 KLRD1Q13241 179 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 PRELID3AQ96N28 172 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 KNTC1P50748 2209 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 IGHV5-51A0A0C4DH38 117 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A10PA6NDY2 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A18PA6NE21 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A16PA6NEW6 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A20PA6NIJ5 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A8PA6NJQ4 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A7PA6NKC0 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A22PA8MWA6 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A12PA8MX19 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A5PA8MXJ8 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A23PA8MXZ1 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 LTAP01374 205 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A15PP0C7V4 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A13PP0C7W8 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A14PP0C7W9 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FAM90A24PP0C7X0 464 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 PI4KAP42356 2102 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 ZNF146Q15072 292 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 MKXQ8IYA7 352 aa10.25□□□□□ -0.77
CTCFL-218ENST00000608440 PHLDA1Q8WV24 401 aaPredicted RBP10.25□□□□□ -0.77
CTCFL-218ENST00000608440 FGF23Q9GZV9 251 aaPredicted RBP10.25□□□□□ -0.77
CTCFL-218ENST00000608440 PATE3B3GLJ2 98 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 IGLL5B9A064 214 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 SYNGR3O43761 229 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 PF4V1P10720 104 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 ZNF503Q96F45 646 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 TMEM167BQ9NRX6 74 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 SIGLEC8Q9NYZ4 499 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 GPR179Q6PRD1 2367 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 E9PLD3 99 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 C16orf97H3BN30 126 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 PRTN3P24158 256 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 BRWD1-AS2P59051 145 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 LCNL1Q6ZST4 164 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 AP5S1Q9NUS5 200 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 TMEM140Q9NV12 185 aa10.24□□□□□ -0.77
CTCFL-218ENST00000608440 IGHV1OR21-1A0A087WYE8 117 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 FNDC10F2Z333 226 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 NHLRC4P0CG21 123 aaPredicted RBP10.23□□□□□ -0.77
CTCFL-218ENST00000608440 FAM106CPP0CH98 169 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 ZNF32P17041 273 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 FAM106AQ4KMX7 169 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 Q6AWC8 147 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 ZFAND6Q6FIF0 208 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 TEX29Q8N6K0 151 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 TANC2Q9HCD6 1990 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 B4GALT1P15291 398 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 ACP1P24666 158 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 DLL3Q9NYJ7 618 aa10.23□□□□□ -0.77
CTCFL-218ENST00000608440 PRO0461Q9UI25 63 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms