RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 RYR1P21817 5038 aa14.32□□□□□ -0.12
SGMS1-208ENST00000608287 IGHV3-49A0A0A0MS15 119 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 TRAV14DV4A0A0A6YYC5 116 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 IGHV7-4-1A0A0J9YVY3 117 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 SCGB2A1O75556 95 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 HOXB5P09067 269 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 TOMM20LQ6UXN7 152 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 TMEM116Q8NCL8 245 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 GINS3Q9BRX5 216 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 SRD5A3Q9H8P0 318 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 TMED3Q9Y3Q3 217 aa14.31□□□□□ -0.12
SGMS1-208ENST00000608287 PUS1Q9Y606 427 aaKnown RBP eCLIP14.31□□□□□ -0.12
SGMS1-208ENST00000608287 C9orf170A2RU37 121 aa14.3□□□□□ -0.12
SGMS1-208ENST00000608287 BTCP35070 178 aa14.3□□□□□ -0.12
SGMS1-208ENST00000608287 LGALS9CQ6DKI2 356 aa14.3□□□□□ -0.12
SGMS1-208ENST00000608287 TMEM170AQ8WVE7 144 aa14.3□□□□□ -0.12
SGMS1-208ENST00000608287 SPAG8Q99932 426 aaPredicted RBP14.3□□□□□ -0.12
SGMS1-208ENST00000608287 RHPN1-AS1Q9BWJ2 59 aa14.3□□□□□ -0.12
SGMS1-208ENST00000608287 U3KQ87 197 aa14.3□□□□□ -0.12
SGMS1-208ENST00000608287 CHEK1O14757 476 aa14.29□□□□□ -0.12
SGMS1-208ENST00000608287 TSPAN4O14817 238 aa14.29□□□□□ -0.12
SGMS1-208ENST00000608287 PITX3O75364 302 aa14.29□□□□□ -0.12
SGMS1-208ENST00000608287 SLC25A4P12235 298 aa14.29□□□□□ -0.12
SGMS1-208ENST00000608287 SLC25A6P12236 298 aa14.29□□□□□ -0.12
SGMS1-208ENST00000608287 RND2P52198 227 aa14.29□□□□□ -0.12
SGMS1-208ENST00000608287 ETFRF1Q6IPR1 90 aa14.29□□□□□ -0.12
SGMS1-208ENST00000608287 IGHV3OR16-13A0A075B7E8 117 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 TRAV30A0A087WSZ9 112 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 IGHV3-74A0A0B4J1X5 117 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 OR4E1P0C645 316 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 ATF4P18848 351 aaPredicted RBP14.28□□□□□ -0.12
SGMS1-208ENST00000608287 ANXA7P20073 488 aaKnown RBP14.28□□□□□ -0.12
SGMS1-208ENST00000608287 CNPY1Q3B7I2 92 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 TIGITQ495A1 244 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 GGNBP1Q5YKI7 109 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 PRSS54Q6PEW0 395 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 RNF2Q99496 336 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 ZFAND3Q9H8U3 227 aa14.28□□□□□ -0.12
SGMS1-208ENST00000608287 KIAA1109Q2LD37 5005 aa14.27□□□□□ -0.12
SGMS1-208ENST00000608287 PLA2G10O15496 165 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 LYRM1O43325 122 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 IFNA4P05014 189 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 IAPPP10997 89 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 DHRS2Q13268 280 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 C4orf46Q504U0 113 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 LYG2Q86SG7 212 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 TMEM217Q8N7C4 229 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 COQ8AQ8NI60 647 aa14.27□□□□□ -0.13
SGMS1-208ENST00000608287 KMT2AQ03164 3969 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 A6NHS1 94 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 FAM90A26D6RGX4 464 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 MED6O75586 246 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 IGKV1-17P01599 117 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 OR10J1P30954 320 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 BMI1P35226 326 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 LINC00299Q6ZSB3 139 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 OR1S2Q8NGQ3 325 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 ACY3Q96HD9 319 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 CCDC32Q9BV29 185 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 UBQLN2Q9UHD9 624 aa14.26□□□□□ -0.13
SGMS1-208ENST00000608287 IGKV3-7A0A075B6H7 116 aa14.25□□□□□ -0.13
SGMS1-208ENST00000608287 IGHV3-66A0A0C4DH42 116 aa14.25□□□□□ -0.13
SGMS1-208ENST00000608287 OR4C46A6NHA9 309 aa14.25□□□□□ -0.13
SGMS1-208ENST00000608287 ADAP1O75689 374 aa14.25□□□□□ -0.13
SGMS1-208ENST00000608287 APOHP02749 345 aaPredicted RBP14.25□□□□□ -0.13
SGMS1-208ENST00000608287 IGLC1P0CG04 106 aa14.25□□□□□ -0.13
SGMS1-208ENST00000608287 ATP5IP56385 69 aaPredicted RBP14.25□□□□□ -0.13
SGMS1-208ENST00000608287 ST8SIA2Q92186 375 aa14.25□□□□□ -0.13
SGMS1-208ENST00000608287 NPIPB3Q92617 1050 aa14.25□□□□□ -0.13
SGMS1-208ENST00000608287 MAGT1Q9H0U3 335 aa14.25□□□□□ -0.13
SGMS1-208ENST00000608287 PAIP2BQ9ULR5 123 aaKnown RBP14.25□□□□□ -0.13
SGMS1-208ENST00000608287 HECTD4Q9Y4D8 3996 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 DEDDO75618 318 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 IFNA21P01568 189 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 NPPCP23582 126 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 TFPI2P48307 235 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 TCF24Q7RTU0 167 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 Q8WTZ3 238 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 S100ZQ8WXG8 99 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 METTL26Q96S19 204 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 GGTLC1Q9BX51 225 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 C20orf85Q9H1P6 137 aa14.24□□□□□ -0.13
SGMS1-208ENST00000608287 WRBO00258 174 aa14.23□□□□□ -0.13
SGMS1-208ENST00000608287 SYNGR2O43760 224 aa14.23□□□□□ -0.13
SGMS1-208ENST00000608287 MED14OSP0DP75 135 aa14.23□□□□□ -0.13
SGMS1-208ENST00000608287 RAB11AP62491 216 aa14.23□□□□□ -0.13
SGMS1-208ENST00000608287 WFDC3Q8IUB2 231 aa14.23□□□□□ -0.13
SGMS1-208ENST00000608287 CIB3Q96Q77 187 aaPredicted RBP14.23□□□□□ -0.13
SGMS1-208ENST00000608287 OVOL2Q9BRP0 275 aa14.23□□□□□ -0.13
SGMS1-208ENST00000608287 TMEM231Q9H6L2 316 aa14.23□□□□□ -0.13
SGMS1-208ENST00000608287 VSIRQ9H7M9 311 aa14.23□□□□□ -0.13
SGMS1-208ENST00000608287 A0A1W2PS18 150 aa14.22□□□□□ -0.13
SGMS1-208ENST00000608287 MPTX1A8MV57 137 aa14.22□□□□□ -0.13
SGMS1-208ENST00000608287 TCRBP04435 133 aa14.22□□□□□ -0.13
SGMS1-208ENST00000608287 YPEL3P61236 119 aaPredicted RBP14.22□□□□□ -0.13
SGMS1-208ENST00000608287 FAM90A2PQ658T7 463 aa14.22□□□□□ -0.13
SGMS1-208ENST00000608287 GBGT1Q8N5D6 347 aa14.22□□□□□ -0.13
SGMS1-208ENST00000608287 NARS2Q96I59 477 aaKnown RBP14.22□□□□□ -0.13
SGMS1-208ENST00000608287 TP53TG1Q9Y2A0 90 aa14.22□□□□□ -0.13
SGMS1-208ENST00000608287 TRAV6A0A075B6T7 132 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms