RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 IGHV3-74A0A0B4J1X5 117 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 RBMY1BA6NDE4 496 aaKnown RBP9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 RBMY1EA6NEQ0 496 aaKnown RBP9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 SYNGR2O43760 224 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 RBMY1DP0C7P1 496 aaKnown RBP9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 IAPPP10997 89 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 HAGHQ16775 308 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 LAMTOR1Q6IAA8 161 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 ETFRF1Q6IPR1 90 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 SLC16A13Q7RTY0 426 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 LILRB2Q8N423 598 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 MITD1Q8WV92 249 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 NPIPB3Q92617 1050 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 SPAG8Q99932 426 aaPredicted RBP9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 GINS3Q9BRX5 216 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 VSIRQ9H7M9 311 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 BATF3Q9NR55 127 aa9.56□□□□□ -0.88
SHROOM1-207ENST00000606676 TRAV6A0A075B6T7 132 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 IFNA4P05014 189 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 OR10J1P30954 320 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 IFITM3Q01628 133 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 ID3Q02535 119 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 FAM90A2PQ658T7 463 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 OR1S2Q8NGQ3 325 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 ST8SIA2Q92186 375 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 ACY3Q96HD9 319 aa9.55□□□□□ -0.88
SHROOM1-207ENST00000606676 WRBO00258 174 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 MED6O75586 246 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 GPX4P36969 197 aaPredicted RBP9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 YPEL3P61236 119 aaPredicted RBP9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 ASAH1Q13510 395 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 GAMTQ14353 236 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 ZNF846Q147U1 533 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 OR4D5Q8NGN0 318 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 CIB3Q96Q77 187 aaPredicted RBP9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 CITED4Q96RK1 184 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 WDR12Q9GZL7 423 aaKnown RBP9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 SRD5A3Q9H8P0 318 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 NUDT15Q9NV35 164 aa9.54□□□□□ -0.88
SHROOM1-207ENST00000606676 IGHV3-66A0A0C4DH42 116 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 FAM240BA0A1B0GVZ2 78 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 PRSS46E5RG02 174 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 SCGB2A1O75556 95 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 UPK1BO75841 260 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 IFNA21P01568 189 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 H2AFB2P0C5Z0 115 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 NPPCP23582 126 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 CRYBB3P26998 211 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 WWC2-AS2Q96NR7 200 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 RCHY1Q96PM5 261 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 SEC22CQ9BRL7 303 aa9.53□□□□□ -0.88
SHROOM1-207ENST00000606676 IGKV1D-37A0A075B6S9 117 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 OR4C46A6NHA9 309 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 DFFBO76075 338 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 NKX2-1P43699 371 aaPredicted RBP9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 PAX9P55771 341 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 POLR2GP62487 172 aaKnown RBP eCLIP9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 RAB11AP62491 216 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 TCF24Q7RTU0 167 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 ZBTB8BQ8NAP8 495 aaPredicted RBP9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 Q8WTZ3 238 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 ZMAT4Q9H898 229 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 UBQLN2Q9UHD9 624 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 U3KQE9 123 aa9.52□□□□□ -0.89
SHROOM1-207ENST00000606676 IGKV3-7A0A075B6H7 116 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 IGKV1OR2-108A0A075B7D4 117 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 H3BP45 60 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 TOMM40O96008 361 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 RD3LP0DJH9 198 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 PSG1P11464 419 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 ZNF90Q03938 601 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 USF2Q15853 346 aaPredicted RBP9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 IAH1Q2TAA2 248 aaPredicted RBP9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 SPANXN5Q5MJ07 72 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 MZT2BQ6NZ67 158 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 ZNF431Q8TF32 576 aaPredicted RBP9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 METTL26Q96S19 204 aa9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 PAIP2BQ9ULR5 123 aaKnown RBP9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 KMT2CQ8NEZ4 4911 aaKnown RBP9.51□□□□□ -0.89
SHROOM1-207ENST00000606676 A0A1W2PS18 150 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 CCSO14618 274 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 SSSCA1O60232 199 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 IL4P05112 153 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 CD5P06127 495 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 BMI1P35226 326 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 TFPI2P48307 235 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 RPP30P78346 268 aaKnown RBP9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 GBGT1Q8N5D6 347 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 SLC35E1Q96K37 410 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 SMIM8Q96KF7 97 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 FAM110AQ9BQ89 295 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 SPATA25Q9BR10 227 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 MS4A6AQ9H2W1 248 aa9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 STRAPQ9Y3F4 350 aaKnown RBP9.5□□□□□ -0.89
SHROOM1-207ENST00000606676 ZFP92A6NM28 416 aa9.49□□□□□ -0.89
SHROOM1-207ENST00000606676 PMS2P5A8MQ11 134 aa9.49□□□□□ -0.89
SHROOM1-207ENST00000606676 MBPP02686 304 aaPredicted RBP9.49□□□□□ -0.89
SHROOM1-207ENST00000606676 P2RY1P47900 373 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms