RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, human

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-222	ENST00000604236	TCEAL7	Q9BRU2	100 aa		12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	UPK2	O00526	184 aa		12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	RPL27A	P46776	148 aa	Known RBP	12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	CNN1	P51911	297 aa	Known RBP	12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	ZNF138	P52744	262 aa		12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	ST6GALNAC6	Q969X2	333 aa		12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	MRPL18	Q9H0U6	180 aa	Known RBP	12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	SMDT1	Q9H4I9	107 aa		12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.49	□□□□□ -0.41
FGFR2-222	ENST00000604236	PRRC2A	P48634	2157 aa	Known RBP	12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	PMS2P5	A8MQ11	134 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	TMEM178B	H3BS89	294 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	AMBP	P02760	352 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	FOLR2	P14207	255 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	TBX15	Q96SF7	602 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	FOXA2	Q9Y261	457 aa	Predicted RBP	12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	CELSR2	Q9HCU4	2923 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	NPIPB11	E5RHQ5	1161 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	OR5R1	Q8NH85	324 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	IGLV3-9	A0A075B6K5	115 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236		A1L4Q6	167 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	SMIM6	P0DI80	62 aa		12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236	FCGR2B	P31994	310 aa	Predicted RBP	12.48	□□□□□ -0.41
FGFR2-222	ENST00000604236		J3QW42	95 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	SRI	P30626	198 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	VDAC2	P45880	294 aa	Predicted RBP	12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	RPL19	P84098	196 aa	Known RBP	12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	OR4C13	Q8NGP0	309 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	PGLYRP4	Q96LB8	373 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	DNAJC4	Q9NNZ3	241 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	SLC45A2	Q9UMX9	530 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	TIMM23	O14925	209 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	AMY1A	P04745	511 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	LY6E	Q16553	131 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	IBA57	Q5T440	356 aa	Known RBP	12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236	TMEM18	Q96B42	140 aa		12.47	□□□□□ -0.41
FGFR2-222	ENST00000604236		A0A1B0GW64	132 aa		12.46	□□□□□ -0.41
FGFR2-222	ENST00000604236	WFDC3	Q8IUB2	231 aa		12.46	□□□□□ -0.41
FGFR2-222	ENST00000604236		M0R3E3	92 aa		12.46	□□□□□ -0.41
FGFR2-222	ENST00000604236	HOXB1	P14653	301 aa	Predicted RBP	12.46	□□□□□ -0.41
FGFR2-222	ENST00000604236	TDRG1	Q3Y452	100 aa		12.46	□□□□□ -0.41
FGFR2-222	ENST00000604236	GOLT1A	Q6ZVE7	132 aa		12.46	□□□□□ -0.41
FGFR2-222	ENST00000604236	TMEM219	Q86XT9	240 aa		12.46	□□□□□ -0.41
FGFR2-222	ENST00000604236	LOC389332	A0A1B0GUA5	103 aa		12.46	□□□□□ -0.42
FGFR2-222	ENST00000604236	ISLR	O14498	428 aa		12.46	□□□□□ -0.42
FGFR2-222	ENST00000604236	UQCRFS1	P47985	274 aa		12.46	□□□□□ -0.42
FGFR2-222	ENST00000604236	PPOX	P50336	477 aa		12.46	□□□□□ -0.42
FGFR2-222	ENST00000604236	TAS2R45	P59539	299 aa		12.46	□□□□□ -0.42
FGFR2-222	ENST00000604236	WFDC12	Q8WWY7	111 aa		12.46	□□□□□ -0.42
FGFR2-222	ENST00000604236	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.46	□□□□□ -0.42
FGFR2-222	ENST00000604236	SEBOX	Q9HB31	216 aa	Predicted RBP	12.46	□□□□□ -0.42
FGFR2-222	ENST00000604236		A0A1W2PPI3	338 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	SNAI2	O43623	268 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	SERF1A	O75920	110 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236		Q71RC1	249 aa	Predicted RBP	12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	KDF1	Q8NAX2	398 aa	Predicted RBP	12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	P2RX4	Q99571	388 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	WASHC3	Q9Y3C0	194 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236		H0YJW9	148 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	PPIF	P30405	207 aa	Known RBP	12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	SUB1	P53999	127 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	LCN12	Q6JVE5	192 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	PDPN	Q86YL7	162 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	RAB9B	Q9NP90	201 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	OR2J3	O76001	311 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	USF1	P22415	310 aa	Predicted RBP	12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	ZNF672	Q499Z4	452 aa	Predicted RBP	12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	FKBP11	Q9NYL4	201 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	PITPNC1	Q9UKF7	332 aa		12.45	□□□□□ -0.42
FGFR2-222	ENST00000604236	GGTLC3	B5MD39	225 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	PDE6D	O43924	150 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	IGHV2-5	P01817	119 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	RPEL1	Q2QD12	228 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	C17orf77	Q96MU5	243 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	OR51M1	Q9H341	326 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236		K7EN84	100 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	STAG3L2	P0CL84	134 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	STAG3L3	P0CL85	134 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	TEX38	Q6PEX7	206 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	SPRY2	O43597	315 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	PFN1	P07737	140 aa	Known RBP	12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	C8orf88	P0DMB2	117 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	HIST1H1B	P16401	226 aa	Known RBP	12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	SIGLECL1	Q8N7X8	197 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	NRGN	Q92686	78 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	LINC00312	Q9Y6C7	94 aa		12.44	□□□□□ -0.42
FGFR2-222	ENST00000604236	TMEM250	H0YL14	139 aa		12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236	GATC	O43716	136 aa	Known RBP	12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236	IL4	P05112	153 aa		12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236	LOX	P28300	417 aa	Predicted RBP	12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236	NF1	P21359	2839 aa		12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236	IGHV1-8	P0DP01	117 aa		12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236	RNASE2	P10153	161 aa	Known RBP	12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236	PAX5	Q02548	391 aa		12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236	BRD3OS	Q6XYD6	125 aa		12.43	□□□□□ -0.42
FGFR2-222	ENST00000604236		B4DEV8	164 aa		12.42	□□□□□ -0.42

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