RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 DDB2Q92466 427 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 BTF3L4Q96K17 158 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 RITA1Q96K30 269 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 NABP2Q9BQ15 211 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 TXNDC17Q9BRA2 123 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 TM2D3Q9BRN9 247 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 SCRT1Q9BWW7 348 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 EIF5A2Q9GZV4 153 aaKnown RBP3.99□□□□□ -1.77
VRK3-226ENST00000602029 JPT1Q9UK76 154 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 WASHC3Q9Y3C0 194 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 A0A0G2JLM5 398 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 C1orf196B1AJZ1 125 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 UBE2CO00762 179 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 ITGB1BP1O14713 200 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 SYNGR2O43760 224 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 MPDU1O75352 247 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 PGLYRP1O75594 196 aaPredicted RBP3.98□□□□□ -1.77
VRK3-226ENST00000602029 ATP6V0CP27449 155 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 MC5RP33032 325 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 HTD2P86397 168 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 NDPQ00604 133 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 FXYD3Q14802 87 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 AARDQ4LEZ3 155 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 RPL39P5Q59GN2 51 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 IGSF11Q5DX21 431 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 SOHLH1Q5JUK2 328 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 ZNF66Q6ZN08 573 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 IQCF2Q8IXL9 164 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 ZNF645Q8N7E2 425 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 ZNF439Q8NDP4 499 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 OR5C1Q8NGR4 320 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 MYOZ3Q8TDC0 251 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 SECTM1Q8WVN6 248 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 MBD3L1Q8WWY6 194 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 EDARADDQ8WWZ3 215 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 NIPSNAP3BQ9BS92 247 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 EDA2RQ9HAV5 297 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 KCNIP2Q9NS61 270 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 PEMTQ9UBM1 199 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 ZNF580Q9UK33 172 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 GAB2Q9UQC2 676 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 FBXO7Q9Y3I1 522 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 RBM7Q9Y580 266 aaKnown RBP3.98□□□□□ -1.77
VRK3-226ENST00000602029 SELENOKQ9Y6D0 94 aa3.98□□□□□ -1.77
VRK3-226ENST00000602029 PKHD1P08F94 4074 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 IGKV1-6A0A0C4DH72 117 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 IGSF23A1L1A6 192 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 C7orf77A4D0Y5 90 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 RBFOX3A6NFN3 312 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 COLCA2A8K830 154 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 TMEM250H0YL14 139 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 FCN1O00602 326 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 RAB29O14966 203 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 RBFOX2O43251 390 aaKnown RBP eCLIP3.97□□□□□ -1.77
VRK3-226ENST00000602029 SSSCA1O60232 199 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 ACTL6BO94805 426 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 IFNA17P01571 189 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 IGLV1-51P01701 117 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 S100A6P06703 90 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 SCTP09683 121 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 CEACAM6P40199 344 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 KIR2DS2P43631 304 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 NPBWR1P48145 328 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 ZNF137PP52743 207 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 AKR1C2P52895 323 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 ATP5IP56385 69 aaPredicted RBP3.97□□□□□ -1.77
VRK3-226ENST00000602029 RPP30P78346 268 aaKnown RBP3.97□□□□□ -1.77
VRK3-226ENST00000602029 NHLH2Q02577 135 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 KIAA0141Q14154 515 aaPredicted RBP3.97□□□□□ -1.77
VRK3-226ENST00000602029 SP6Q3SY56 376 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 DNLZQ5SXM8 178 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 TMEM182Q6ZP80 229 aaPredicted RBP3.97□□□□□ -1.77
VRK3-226ENST00000602029 ZNF833PQ6ZTB9 187 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 C5orf24Q7Z6I8 188 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 NPBQ8NG41 125 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 OR9G4Q8NGQ1 327 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 RNASE11Q8TAA1 199 aaKnown RBP3.97□□□□□ -1.77
VRK3-226ENST00000602029 FAM213BQ8TBF2 198 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 SCGB1C1Q8TD33 95 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 RXFP4Q8TDU9 374 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 TVP23CQ96ET8 276 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 HSD17B10Q99714 261 aaKnown RBP3.97□□□□□ -1.77
VRK3-226ENST00000602029 AGMATQ9BSE5 352 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 GGACTQ9BVM4 153 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 CTDSP1Q9GZU7 261 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 SRD5A3Q9H8P0 318 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 MANBALQ9NQG1 85 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 PRR13Q9NZ81 148 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 HSPB7Q9UBY9 170 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 DNAH6Q9C0G6 4158 aa3.97□□□□□ -1.77
VRK3-226ENST00000602029 IGKV1D-13A0A0B4J2D9 117 aa3.96□□□□□ -1.78
VRK3-226ENST00000602029 LOC102723971A0A1B0GUV8 181 aa3.96□□□□□ -1.78
VRK3-226ENST00000602029 OR11H12B2RN74 326 aa3.96□□□□□ -1.78
VRK3-226ENST00000602029 FNDC10F2Z333 226 aa3.96□□□□□ -1.78
VRK3-226ENST00000602029 C17orf112F2Z3M2 114 aa3.96□□□□□ -1.78
VRK3-226ENST00000602029 H0YJW9 148 aa3.96□□□□□ -1.78
VRK3-226ENST00000602029 M0R1X1 148 aa3.96□□□□□ -1.78
VRK3-226ENST00000602029 YPEL1O60688 119 aa3.96□□□□□ -1.78
VRK3-226ENST00000602029 BRI3O95415 125 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms