RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
SSBP4-211ENST00000601614 A0A0B4J293 547 aa11.2□□□□□ -0.62
SSBP4-211ENST00000601614 CORTO00230 105 aa11.2□□□□□ -0.62
SSBP4-211ENST00000601614 IGKV1-5P01602 117 aa11.2□□□□□ -0.62
SSBP4-211ENST00000601614 P0C879 139 aa11.2□□□□□ -0.62
SSBP4-211ENST00000601614 IGLC1P0CG04 106 aa11.2□□□□□ -0.62
SSBP4-211ENST00000601614 SLC35G3Q8N808 338 aa11.2□□□□□ -0.62
SSBP4-211ENST00000601614 SAV1Q9H4B6 383 aaPredicted RBP11.2□□□□□ -0.62
SSBP4-211ENST00000601614 BUB3O43684 328 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 HBE1P02100 147 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 PRM2P04554 102 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 ETV6P41212 452 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 SCAND1P57086 179 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 DHODHQ02127 395 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 IDNKQ5T6J7 187 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 OR5H2Q8NGV7 314 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 NRG4Q8WWG1 115 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 WDR12Q9GZL7 423 aaKnown RBP11.19□□□□□ -0.62
SSBP4-211ENST00000601614 DIABLOQ9NR28 239 aa11.19□□□□□ -0.62
SSBP4-211ENST00000601614 RPS10-NUDT3A0A1W2PQS6 291 aa11.18□□□□□ -0.62
SSBP4-211ENST00000601614 NUDT3O95989 172 aa11.18□□□□□ -0.62
SSBP4-211ENST00000601614 NAT1P18440 290 aa11.18□□□□□ -0.62
SSBP4-211ENST00000601614 RPL5P46777 297 aaKnown RBP11.18□□□□□ -0.62
SSBP4-211ENST00000601614 BSXQ3C1V8 233 aa11.18□□□□□ -0.62
SSBP4-211ENST00000601614 OR4B1Q8NGF8 309 aa11.18□□□□□ -0.62
SSBP4-211ENST00000601614 OR6F1Q8NGZ6 308 aa11.18□□□□□ -0.62
SSBP4-211ENST00000601614 TRAV30A0A087WSZ9 112 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 F6UB75 175 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 IL4P05112 153 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 HRH1P35367 487 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 HOXA1P49639 335 aaPredicted RBP11.17□□□□□ -0.62
SSBP4-211ENST00000601614 SUB1P53999 127 aaKnown RBP eCLIP11.17□□□□□ -0.62
SSBP4-211ENST00000601614 ZNF79Q15937 498 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 PRSS54Q6PEW0 395 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 LYSMD2Q8IV50 215 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 Q8WTZ3 238 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 CLUHP3Q96NS8 147 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 GOLT1BQ9Y3E0 138 aa11.17□□□□□ -0.62
SSBP4-211ENST00000601614 A0A0G2JRQ6 117 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 NXPH3O95157 252 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■□□ 17
SSBP4-211ENST00000601614 RND2P52198 227 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 XGP55808 180 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 TAS2R46P59540 309 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 TAS2R20P59543 309 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 YPEL3P61236 119 aaPredicted RBP11.16□□□□□ -0.62
SSBP4-211ENST00000601614 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 OR1S2Q8NGQ3 325 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 LINC00052Q96N35 136 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 C7orf50Q9BRJ6 194 aaKnown RBP11.16□□□□□ -0.62
SSBP4-211ENST00000601614 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
SSBP4-211ENST00000601614 SOCS3O14543 225 aa11.15□□□□□ -0.62
SSBP4-211ENST00000601614 HLA-DMAP28067 261 aa11.15□□□□□ -0.62
SSBP4-211ENST00000601614 OR10J1P30954 320 aa11.15□□□□□ -0.62
SSBP4-211ENST00000601614 ALDH3B2P48448 385 aa11.15□□□□□ -0.62
SSBP4-211ENST00000601614 RORCP51449 518 aa11.15□□□□□ -0.62
SSBP4-211ENST00000601614 CCL18P55774 89 aa11.15□□□□□ -0.62
SSBP4-211ENST00000601614 PSG9Q00887 426 aa11.15□□□□□ -0.62
SSBP4-211ENST00000601614 Q5VSD8 79 aa11.15□□□□□ -0.62
SSBP4-211ENST00000601614 F5H768 121 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 SCGB2A1O75556 95 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 BTF3P20290 206 aaKnown RBP11.14□□□□□ -0.63
SSBP4-211ENST00000601614 PSMB9P28065 219 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 DLK1P80370 383 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 FCN2Q15485 313 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 FAM78BQ5VT40 261 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 SSX7Q7RTT5 188 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 RNF141Q8WVD5 230 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 TP53RKQ96S44 253 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 Q9H8V8 135 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 SSR3Q9UNL2 185 aa11.14□□□□□ -0.63
SSBP4-211ENST00000601614 PLAC8L1A1L4L8 177 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 ZNF705GA8MUZ8 300 aaPredicted RBP11.13□□□□□ -0.63
SSBP4-211ENST00000601614 EBAG9O00559 213 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 DEFB130BP0DP73 79 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 DEFB130AP0DP74 79 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 ELK1P19419 428 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 S100GP29377 79 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 AKR1C2P52895 323 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 MAGT1Q9H0U3 335 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 SCPEP1Q9HB40 452 aa11.13□□□□□ -0.63
SSBP4-211ENST00000601614 TOMM40O96008 361 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 HSPA13P48723 471 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 PAX9P55771 341 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 UCP3P55916 312 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 LPCAT3Q6P1A2 487 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 AMTNQ6UX39 209 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 GPR146Q96CH1 333 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 CNBD2Q96M20 576 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 PDCD10Q9BUL8 212 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 KLK11Q9UBX7 282 aa11.12□□□□□ -0.63
SSBP4-211ENST00000601614 A0A0J9YX75 114 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 LYRM9A8MSI8 78 aa11.11□□□□□ -0.63
SSBP4-211ENST00000601614 GSTZ1O43708 216 aaPredicted RBP11.11□□□□□ -0.63
SSBP4-211ENST00000601614 PSG1P11464 419 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms