RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 A0A0A6YYD4 124 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 TRAV2A0A0B4J234 112 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 TRBV5-5A0A0J9YX44 114 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 ZNF705FA8MVS1 300 aaPredicted RBP4.68□□□□□ -1.66
LINC00343-209ENST00000601607 TRDCB7Z8K6 153 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 CTSGP08311 255 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 ZNF705DP0CH99 300 aaPredicted RBP4.68□□□□□ -1.66
LINC00343-209ENST00000601607 ZNF705BP0CI00 300 aaPredicted RBP4.68□□□□□ -1.66
LINC00343-209ENST00000601607 DNAH10OSP0CZ25 163 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 HLA-GP17693 338 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 SRMP19623 302 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 GATA2P23769 480 aaPredicted RBP4.68□□□□□ -1.66
LINC00343-209ENST00000601607 LINC00315P59091 139 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 DAD1P61803 113 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 OXA1LQ15070 435 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 USF2Q15853 346 aaPredicted RBP4.68□□□□□ -1.66
LINC00343-209ENST00000601607 Q56UQ5 140 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 STXBP6Q8NFX7 210 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 VSTM2AQ8TAG5 236 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 DGCR14Q96DF8 476 aaKnown RBP4.68□□□□□ -1.66
LINC00343-209ENST00000601607 TMEM59Q9BXS4 323 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 C12orf4Q9NQ89 552 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 ZNF586Q9NXT0 402 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 MGAT4AQ9UM21 535 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 RBM7Q9Y580 266 aaKnown RBP4.68□□□□□ -1.66
LINC00343-209ENST00000601607 YTHDF2Q9Y5A9 579 aaKnown RBP4.68□□□□□ -1.66
LINC00343-209ENST00000601607 RFNGQ9Y644 331 aa4.68□□□□□ -1.66
LINC00343-209ENST00000601607 K7EIM0 57 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 K7EQG2 157 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 FABP7O15540 132 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 CD5P06127 495 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 EIF4EP06730 217 aaKnown RBP4.67□□□□□ -1.66
LINC00343-209ENST00000601607 CELP19835 753 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 FGF9P31371 208 aaPredicted RBP4.67□□□□□ -1.66
LINC00343-209ENST00000601607 SERPINB10P48595 397 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 TMEM50BP56557 158 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 RPL30P62888 115 aaKnown RBP4.67□□□□□ -1.66
LINC00343-209ENST00000601607 SLC25A24Q6NUK1 477 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 RPL22L1Q6P5R6 122 aaKnown RBP4.67□□□□□ -1.66
LINC00343-209ENST00000601607 KCTD9Q7L273 389 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 AQP12AQ8IXF9 295 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 SPAG16Q8N0X2 631 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 CBR4Q8N4T8 237 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 GDPD1Q8N9F7 314 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 DUSP18Q8NEJ0 188 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 OR10W1Q8NGF6 305 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 OR4A4PQ8NGN8 299 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 MYCBPQ99417 103 aaPredicted RBP4.67□□□□□ -1.66
LINC00343-209ENST00000601607 VSIRQ9H7M9 311 aa4.67□□□□□ -1.66
LINC00343-209ENST00000601607 PUS1Q9Y606 427 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC00343-209ENST00000601607 TRBV6-7A0A0A0MS04 114 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 SMIM9A6NGZ8 99 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 G3V2T6 193 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 J3QRK9 145 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 SOCS1O15524 211 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 OXTP01178 125 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 ASIPP42127 132 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 NUTF2P61970 127 aaKnown RBP4.66□□□□□ -1.66
LINC00343-209ENST00000601607 RPS11P62280 158 aaKnown RBP eCLIP4.66□□□□□ -1.66
LINC00343-209ENST00000601607 UNC119Q13432 240 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 CLINT1Q14677 625 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 Q499Y3 187 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 PSMG4Q5JS54 123 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 TMEM69Q5SWH9 247 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 SPATA24Q86W54 205 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 CDH26Q8IXH8 852 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 OR4S2Q8NH73 311 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 OR10J5Q8NHC4 309 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 SMIM19Q96E16 107 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 RAB40CQ96S21 281 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 ATP6V0BQ99437 205 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 UQCC2Q9BRT2 126 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 TM2D1Q9BX74 207 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 GABARAPL3Q9BY60 117 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 FAM107BQ9H098 131 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 FNDC4Q9H6D8 234 aaPredicted RBP4.66□□□□□ -1.66
LINC00343-209ENST00000601607 AMBNQ9NP70 447 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 GHRLQ9UBU3 117 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 MRPS7Q9Y2R9 242 aaKnown RBP4.66□□□□□ -1.66
LINC00343-209ENST00000601607 PRELID3BQ9Y3B1 194 aa4.66□□□□□ -1.66
LINC00343-209ENST00000601607 TRAV3A0A0B4J244 114 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 F5H768 121 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 CYB5BO43169 146 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 P0C879 139 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 LIMS3P0CW19 117 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 LIMS4P0CW20 117 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 OR13C7P0DN81 318 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 PRB4P10163 310 aaPredicted RBP4.65□□□□□ -1.67
LINC00343-209ENST00000601607 GNRHRP30968 328 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 FXYD7P58549 80 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 WT1-ASQ06250 92 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 DNAL1Q4LDG9 190 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 CCDC58Q4VC31 144 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 TOMM20LQ6UXN7 152 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 NKAIN3Q8N8D7 197 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 DCANP1Q8TF63 244 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 TRUB1Q8WWH5 349 aaKnown RBP4.65□□□□□ -1.67
LINC00343-209ENST00000601607 MAFIPQ8WZ33 124 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 SLC29A1Q99808 456 aa4.65□□□□□ -1.67
LINC00343-209ENST00000601607 CMSS1Q9BQ75 279 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms