RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 UBE2NLQ5JXB2 153 aa11.9□□□□□ -0.5
USE1-208ENST00000600970 FAM222AQ5U5X8 452 aa11.9□□□□□ -0.5
USE1-208ENST00000600970 VCX3BQ9H321 246 aa11.9□□□□□ -0.5
USE1-208ENST00000600970 RFNGQ9Y644 331 aa11.9□□□□□ -0.5
USE1-208ENST00000600970 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.5
USE1-208ENST00000600970 HTN3P15516 51 aa11.89□□□□□ -0.51
USE1-208ENST00000600970 FXYD7P58549 80 aa11.89□□□□□ -0.51
USE1-208ENST00000600970 BSXQ3C1V8 233 aa11.89□□□□□ -0.51
USE1-208ENST00000600970 GDF5OSQ5U4N7 250 aa11.89□□□□□ -0.51
USE1-208ENST00000600970 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
USE1-208ENST00000600970 NRN1Q9NPD7 142 aa11.89□□□□□ -0.51
USE1-208ENST00000600970 APOBP04114 4563 aaKnown RBP11.89□□□□□ -0.51
USE1-208ENST00000600970 TEX48A0A1B0GUV7 120 aa11.88□□□□□ -0.51
USE1-208ENST00000600970 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
USE1-208ENST00000600970 AKR1C2P52895 323 aa11.88□□□□□ -0.51
USE1-208ENST00000600970 OXA1LQ15070 435 aa11.88□□□□□ -0.51
USE1-208ENST00000600970 USF2Q15853 346 aaPredicted RBP11.88□□□□□ -0.51
USE1-208ENST00000600970 OR1S2Q8NGQ3 325 aa11.88□□□□□ -0.51
USE1-208ENST00000600970 Q8WTZ3 238 aa11.88□□□□□ -0.51
USE1-208ENST00000600970 ENY2Q9NPA8 101 aa11.88□□□□□ -0.51
USE1-208ENST00000600970 RAB26Q9ULW5 256 aa11.88□□□□□ -0.51
USE1-208ENST00000600970 IGKV3-20P01619 116 aa11.87□□□□□ -0.51
USE1-208ENST00000600970 NKX2-1P43699 371 aaPredicted RBP11.87□□□□□ -0.51
USE1-208ENST00000600970 DHODHQ02127 395 aa11.87□□□□□ -0.51
USE1-208ENST00000600970 TMEM88Q6PEY1 159 aa11.87□□□□□ -0.51
USE1-208ENST00000600970 SIGLEC15Q6ZMC9 328 aa11.87□□□□□ -0.51
USE1-208ENST00000600970 SAMD12Q8N8I0 201 aa11.87□□□□□ -0.51
USE1-208ENST00000600970 GPX8Q8TED1 209 aa11.87□□□□□ -0.51
USE1-208ENST00000600970 TP53RKQ96S44 253 aa11.87□□□□□ -0.51
USE1-208ENST00000600970 RPS10-NUDT3A0A1W2PQS6 291 aa11.86□□□□□ -0.51
USE1-208ENST00000600970 DEFB1P60022 68 aa11.86□□□□□ -0.51
USE1-208ENST00000600970 YPEL3P61236 119 aaPredicted RBP11.86□□□□□ -0.51
USE1-208ENST00000600970 RND3P61587 244 aa11.86□□□□□ -0.51
USE1-208ENST00000600970 Q8N1X5 172 aa11.86□□□□□ -0.51
USE1-208ENST00000600970 A0A0G2JRQ6 117 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 BUB3O43684 328 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 IL4P05112 153 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 PI3P19957 117 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 OR10J1P30954 320 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 TGFBR1P36897 503 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 RND2P52198 227 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 FAM3BP58499 235 aaPredicted RBP11.85□□□□□ -0.51
USE1-208ENST00000600970 PRSS54Q6PEW0 395 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 CROCCP3Q8IVE0 287 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 ZNF709Q8N972 641 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 TMED3Q9Y3Q3 217 aa11.85□□□□□ -0.51
USE1-208ENST00000600970 ATG12O94817 140 aa11.84□□□□□ -0.51
USE1-208ENST00000600970 PGAM2P15259 253 aa11.84□□□□□ -0.51
USE1-208ENST00000600970 HTR2BP41595 481 aa11.84□□□□□ -0.51
USE1-208ENST00000600970 PIGPP57054 158 aa11.84□□□□□ -0.51
USE1-208ENST00000600970 YTHDF1Q9BYJ9 559 aaKnown RBP11.84□□□□□ -0.51
USE1-208ENST00000600970 SAV1Q9H4B6 383 aaPredicted RBP11.84□□□□□ -0.51
USE1-208ENST00000600970 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
USE1-208ENST00000600970 C3orf85A0A1B0GTC6 90 aa11.83□□□□□ -0.52
USE1-208ENST00000600970 LOC102723971A0A1B0GUV8 181 aa11.83□□□□□ -0.52
USE1-208ENST00000600970 SLC25A4P12235 298 aa11.83□□□□□ -0.52
USE1-208ENST00000600970 RPS19P39019 145 aaKnown RBP11.83□□□□□ -0.52
USE1-208ENST00000600970 C1orf158Q8N1D5 194 aa11.83□□□□□ -0.52
USE1-208ENST00000600970 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
USE1-208ENST00000600970 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
USE1-208ENST00000600970 ZNF486Q96H40 463 aaPredicted RBP11.83□□□□□ -0.52
USE1-208ENST00000600970 CLUHP3Q96NS8 147 aa11.83□□□□□ -0.52
USE1-208ENST00000600970 SLC35B3Q9H1N7 401 aa11.83□□□□□ -0.52
USE1-208ENST00000600970 NBDYA0A0U1RRE5 68 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 M0QYG6 137 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 GSTZ1O43708 216 aaPredicted RBP11.82□□□□□ -0.52
USE1-208ENST00000600970 NXPH3O95157 252 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 HBE1P02100 147 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 RCVRNP35243 200 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 SPCS3P61009 180 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 DAD1P61803 113 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 TRIM16LQ309B1 348 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 SP6Q3SY56 376 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 FOXI2Q6ZQN5 318 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 OR4B1Q8NGF8 309 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 RRNAD1Q96FB5 475 aaKnown RBP11.82□□□□□ -0.52
USE1-208ENST00000600970 LINC00052Q96N35 136 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 ATG101Q9BSB4 218 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 WDR12Q9GZL7 423 aaKnown RBP11.82□□□□□ -0.52
USE1-208ENST00000600970 SCRT2Q9NQ03 307 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 GOLT1BQ9Y3E0 138 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 DNAH5Q8TE73 4624 aa11.82□□□□□ -0.52
USE1-208ENST00000600970 TOMM40O96008 361 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 RD3LP0DJH9 198 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 C2orf83Q53S99 150 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 LHFPL1Q86WI0 220 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 SNX29P2Q8IUI4 249 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 ZNRF2Q8NHG8 242 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 RNASEH2CQ8TDP1 164 aaKnown RBP11.81□□□□□ -0.52
USE1-208ENST00000600970 NPIPB3Q92617 1050 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 HERC1Q15751 4861 aa11.81□□□□□ -0.52
USE1-208ENST00000600970 PSG1P11464 419 aa11.8□□□□□ -0.52
USE1-208ENST00000600970 UCP1P25874 307 aa11.8□□□□□ -0.52
USE1-208ENST00000600970 NEDD8Q15843 81 aa11.8□□□□□ -0.52
USE1-208ENST00000600970 ZNF79Q15937 498 aa11.8□□□□□ -0.52
USE1-208ENST00000600970 RRN3P1Q2M238 152 aa11.8□□□□□ -0.52
USE1-208ENST00000600970 AARDQ4LEZ3 155 aa11.8□□□□□ -0.52
USE1-208ENST00000600970 OR51G1Q8NGK1 321 aa11.8□□□□□ -0.52
USE1-208ENST00000600970 OR52E5Q8NH55 327 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms